RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PLRG1O43660 514 aaKnown RBP15.15■□□□□ 0.02
PNKP-202ENST00000593706 SDC3O75056 442 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 NUDT1P36639 197 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 USP8P40818 1118 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 MAN2A1Q16706 1144 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 EXOC3L4Q17RC7 722 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 SFMBT2Q5VUG0 894 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 SMYD5Q6GMV2 418 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 CXorf57Q6NSI4 855 aaKnown RBP15.15■□□□□ 0.02
PNKP-202ENST00000593706 FBXL19Q6PCT2 694 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 Q6ZVU0 165 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 ENOSF1Q7L5Y1 443 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 IQCHQ86VS3 1027 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 FRS2Q8WU20 508 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 ZNF606Q8WXB4 792 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 PRMT1Q99873 361 aaKnown RBP15.15■□□□□ 0.02
PNKP-202ENST00000593706 ACP6Q9NPH0 428 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 VPS28Q9UK41 221 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 VANGL2Q9ULK5 521 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 DMTF1Q9Y222 760 aa15.15■□□□□ 0.02
PNKP-202ENST00000593706 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.14■□□□□ 0.01
PNKP-202ENST00000593706 C10orf142B7Z368 130 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 RRP8O43159 456 aaKnown RBP15.14■□□□□ 0.01
PNKP-202ENST00000593706 CKMT2P17540 419 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 RXRGP48443 463 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 CNTN1Q12860 1018 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 OVGP1Q12889 678 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 NME3Q13232 169 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 ZNF177Q13360 481 aaPredicted RBP15.14■□□□□ 0.01
PNKP-202ENST00000593706 ILKQ13418 452 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 TAF5Q15542 800 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 HS1BP3Q53T59 392 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 AGBL4Q5VU57 503 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 FBXL22Q6P050 247 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 TMEM110Q86TL2 294 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 TRIM69Q86WT6 500 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 SPATS2Q86XZ4 545 aaKnown RBP15.14■□□□□ 0.01
PNKP-202ENST00000593706 PASD1Q8IV76 773 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 DEFB106AQ8N104 65 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 BAP1Q92560 729 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 TSC1Q92574 1164 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 UBL7Q96S82 380 aaPredicted RBP15.14■□□□□ 0.01
PNKP-202ENST00000593706 MYOCQ99972 504 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 MUC3BQ9H195 1237 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 ARHGAP20Q9P2F6 1191 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 DACH1Q9UI36 760 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 SARDHQ9UL12 918 aa15.14■□□□□ 0.01
PNKP-202ENST00000593706 CHD5Q8TDI0 1954 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 PRAMEF26H0Y7S4 382 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 ALOX15BO15296 676 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 ATP9BO43861 1147 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 HSF2BPO75031 334 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 GRAP2O75791 330 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 ITPKBP27987 946 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 GGCXP38435 758 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 EIF2S3P41091 472 aaKnown RBP15.13■□□□□ 0.01
PNKP-202ENST00000593706 MTIF2P46199 727 aaKnown RBP15.13■□□□□ 0.01
PNKP-202ENST00000593706 PLK1P53350 603 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 DLG2Q15700 870 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 ARHGAP44Q17R89 818 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 VWA3BQ502W6 1294 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 EFHC1Q5JVL4 640 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 CDKAL1Q5VV42 579 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 FAM114A1Q8IWE2 563 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 FAM131CQ96AQ9 280 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 CCDC114Q96M63 670 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 NOX5Q96PH1 765 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 TUBGCP2Q9BSJ2 902 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 FEM1AQ9BSK4 669 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 NRSN2Q9GZP1 204 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 NDST4Q9H3R1 872 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 PREBQ9HCU5 417 aa15.13■□□□□ 0.01
PNKP-202ENST00000593706 SAMSN1Q9NSI8 373 aaKnown RBP15.13■□□□□ 0.01
PNKP-202ENST00000593706 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
PNKP-202ENST00000593706 FLNBO75369 2602 aaKnown RBP15.13■□□□□ 0.01
PNKP-202ENST00000593706 TLX3O43711 291 aaPredicted RBP15.12■□□□□ 0.01
PNKP-202ENST00000593706 GLI1P08151 1106 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 GLDCP23378 1020 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 IRAK1P51617 712 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 DAB2P98082 770 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 MTA1Q13330 715 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 AUHQ13825 339 aaKnown RBP15.12■□□□□ 0.01
PNKP-202ENST00000593706 KIF26BQ2KJY2 2108 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 HSP90AA4PQ58FG1 418 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 TCP11X2Q5H9J9 407 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 KANSL1Q7Z3B3 1105 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 SH2D3CQ8N5H7 860 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 ENOX1Q8TC92 643 aaKnown RBP15.12■□□□□ 0.01
PNKP-202ENST00000593706 KLHDC7BQ96G42 594 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 PPP1R13BQ96KQ4 1090 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 FAM81BQ96LP2 452 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 FCRL3Q96P31 734 aaPredicted RBP15.12■□□□□ 0.01
PNKP-202ENST00000593706 SLC2A13Q96QE2 648 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 CPXM1Q96SM3 734 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 SYNCQ9H7C4 482 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 DYRK4Q9NR20 520 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 ASNSD1Q9NWL6 643 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 CLCA2Q9UQC9 943 aa15.12■□□□□ 0.01
PNKP-202ENST00000593706 CA5BQ9Y2D0 317 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms