RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 CAMK4Q16566 473 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 PTPN20Q4JDL3 420 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 SETMARQ53H47 684 aaPredicted RBP10.42□□□□□ -0.74
VMP1-214ENST00000592106 HS1BP3Q53T59 392 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 CCDC157Q569K6 752 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 CXorf57Q6NSI4 855 aaKnown RBP10.42□□□□□ -0.74
VMP1-214ENST00000592106 LRRC31Q6UY01 552 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.42□□□□□ -0.74
VMP1-214ENST00000592106 IQCHQ86VS3 1027 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 AADATQ8N5Z0 425 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 TMEM35BQ8NCS4 154 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 RNF166Q96A37 237 aaPredicted RBP10.42□□□□□ -0.74
VMP1-214ENST00000592106 CNDP2Q96KP4 475 aaKnown RBP10.42□□□□□ -0.74
VMP1-214ENST00000592106 ORAI3Q9BRQ5 295 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 WDCPQ9H6R7 721 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 PREBQ9HCU5 417 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.42□□□□□ -0.74
VMP1-214ENST00000592106 PCDHGA1Q9Y5H4 931 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 PLXNA2O75051 1894 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 TMEM131Q92545 1883 aa10.42□□□□□ -0.74
VMP1-214ENST00000592106 A0A1W2PR77 199 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 KCNK3O14649 394 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 PLRG1O43660 514 aaKnown RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 ATP9BO43861 1147 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 BNIP3LO60238 219 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 PAGE1O75459 146 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 RFPL3O75679 317 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 DKK1O94907 266 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 LDOC1O95751 146 aaPredicted RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 F9P00740 461 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 FECHP22830 423 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 EPHA8P29322 1005 aaPredicted RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 DRD3P35462 400 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 DEUP1Q05D60 604 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 RAPGEF1Q13905 1077 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 STAT4Q14765 748 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 DLG2Q15700 870 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 FAM102AQ5T9C2 384 aaPredicted RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 SETD3Q86TU7 594 aaPredicted RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 TMPRSS12Q86WS5 348 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 TRIM69Q86WT6 500 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 WDTC1Q8N5D0 677 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 SH2D3CQ8N5H7 860 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 MFSD2AQ8NA29 543 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 DCAF4L2Q8NA75 395 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 PIP4K2CQ8TBX8 421 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 FRS2Q8WU20 508 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 PPP1R16AQ96I34 528 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 FEM1AQ9BSK4 669 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 TKTL2Q9H0I9 626 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 SIK2Q9H0K1 926 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 ERVMER34-1Q9H9K5 563 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 TOR4AQ9NXH8 423 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 DKK4Q9UBT3 224 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 HS3ST4Q9Y661 456 aa10.41□□□□□ -0.74
VMP1-214ENST00000592106 COL5A1P20908 1838 aaPredicted RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 TP53BP1Q12888 1972 aaPredicted RBP10.41□□□□□ -0.74
VMP1-214ENST00000592106 FASNP49327 2511 aaKnown RBP10.4□□□□□ -0.74
VMP1-214ENST00000592106 PRAMEF26H0Y7S4 382 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 TLR4O00206 839 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 MCF2LO15068 1137 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 LATO43561 262 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 RNGTTO60942 597 aaKnown RBP10.4□□□□□ -0.74
VMP1-214ENST00000592106 LSM8O95777 96 aaKnown RBP10.4□□□□□ -0.74
VMP1-214ENST00000592106 PRNPP04156 253 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 WNT1P04628 370 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 TPM2P07951 284 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 C1SP09871 688 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 RECQLP46063 649 aaPredicted RBP10.4□□□□□ -0.74
VMP1-214ENST00000592106 NXPH1P58417 271 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 RNASE9P60153 205 aaKnown RBP10.4□□□□□ -0.74
VMP1-214ENST00000592106 PPP2CBP62714 309 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 PPP2CAP67775 309 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 C5orf22Q49AR2 442 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 VWA3BQ502W6 1294 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 C6orf118Q5T5N4 469 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 DHRS13Q6UX07 377 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 Q6ZVU0 165 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 SLC47A2Q86VL8 602 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 GATAD2AQ86YP4 633 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 FAM71AQ8IYT1 594 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 ATP11CQ8NB49 1132 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 WNT2BQ93097 391 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 NXPE2Q96DL1 559 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 C18orf8Q96DM3 657 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 PGAP3Q96FM1 320 aaPredicted RBP10.4□□□□□ -0.74
VMP1-214ENST00000592106 NPY6RQ99463 290 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 TUBGCP2Q9BSJ2 902 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 NDST4Q9H3R1 872 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 SIX2Q9NPC8 291 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 ARHGEF38Q9NXL2 777 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 CHMP5Q9NZZ3 219 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 HS3ST2Q9Y278 367 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 TBC1D30Q9Y2I9 924 aa10.4□□□□□ -0.74
VMP1-214ENST00000592106 CHD6Q8TD26 2715 aa10.4□□□□□ -0.75
VMP1-214ENST00000592106 FAM208BQ5VWN6 2430 aa10.39□□□□□ -0.75
VMP1-214ENST00000592106 SMAPO00193 183 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms