RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 SERPINB8P50452 374 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 CCNG1P51959 295 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 COPAP53621 1224 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 BLMHQ13867 455 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 SPRYD7Q5W111 196 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 ZNF354CQ86Y25 554 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 MARK4Q96L34 752 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 DPPA5A6NC42 116 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-207ENST00000591598 VAPBO95292 243 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 UBTFL6P0CB48 400 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-207ENST00000591598 MSX2P35548 267 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-207ENST00000591598 GRM3Q14832 879 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-207ENST00000591598 SLC9B1Q4ZJI4 515 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 DENND6AQ8IWF6 608 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 DEFB107AQ8IZN7 70 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 OMDQ99983 421 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
CTDP1-207ENST00000591598 GTF2IRD1Q9UHL9 959 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 HTTP42858 3142 aa17.09■□□□□ 0.33
CTDP1-207ENST00000591598 GABRDO14764 452 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 LIMK2P53671 638 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 ADAM17P78536 824 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 KLC1Q07866 573 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 DNAL1Q4LDG9 190 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 SDHAF4Q5VUM1 108 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 RNF135Q8IUD6 432 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 KBTBD2Q8IY47 623 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 CCNYL1Q8N7R7 359 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 MAPK15Q8TD08 544 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 KCTD13Q8WZ19 329 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 FTHL17Q9BXU8 183 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 NMRAL1Q9HBL8 299 aa17.08■□□□□ 0.33
CTDP1-207ENST00000591598 OR4Q2P0C623 313 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 PPIDQ08752 370 aaKnown RBP17.08■□□□□ 0.32
CTDP1-207ENST00000591598 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 CNGB3Q9NQW8 809 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 STX18Q9P2W9 335 aaKnown RBP17.08■□□□□ 0.32
CTDP1-207ENST00000591598 ZSWIM8A7E2V4 1837 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 AIM2O14862 343 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 SMNDC1O75940 238 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTDP1-207ENST00000591598 MPSTP25325 297 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 EPHA3P29320 983 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 SERPINB6P35237 376 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 LHX1P48742 406 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 MPP1Q00013 466 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 NOMO2Q5JPE7 1267 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 IL31Q6EBC2 164 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 SCN4BQ8IWT1 228 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 SH3TC2Q8TF17 1288 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 KCTD4Q8WVF5 259 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 SMARCD1Q96GM5 515 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 GBA3Q9H227 469 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 TMLHEQ9NVH6 421 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 NDE1Q9NXR1 346 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 MPP6Q9NZW5 540 aa17.08■□□□□ 0.32
CTDP1-207ENST00000591598 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 SKIP12755 728 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 GRK2P25098 689 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 NAGLUP54802 743 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 TUBB3Q13509 450 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 XKR4Q5GH76 650 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 IZUMO2Q6UXV1 221 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 SLC41A1Q8IVJ1 513 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 CNTD1Q8N815 330 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
CTDP1-207ENST00000591598 OR52B2Q96RD2 323 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 MMADHCQ9H3L0 296 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-207ENST00000591598 AGO3Q9H9G7 860 aaKnown RBP17.07■□□□□ 0.32
CTDP1-207ENST00000591598 PLA2G4CQ9UP65 541 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 LAMA2P24043 3122 aaKnown RBP17.07■□□□□ 0.32
CTDP1-207ENST00000591598 FBXO21O94952 628 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 ANPEPP15144 967 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 LRPAP1P30533 357 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 PGFP49763 221 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 SMYD5Q6GMV2 418 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 ITPRIPL1Q6GPH6 555 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 HPS6Q86YV9 775 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 RNF148Q8N7C7 305 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 RAB3IL1Q8TBN0 382 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 TSNARE1Q96NA8 513 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 NUF2Q9BZD4 464 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 NDFIP2Q9NV92 336 aa17.07■□□□□ 0.32
CTDP1-207ENST00000591598 RPL26L1Q9UNX3 145 aaKnown RBP17.07■□□□□ 0.32
CTDP1-207ENST00000591598 ZCCHC18P0CG32 403 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 GNAT1P11488 350 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 CHRNA4P43681 627 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 ITGA7Q13683 1181 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 PRPSAP1Q14558 356 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 PCBP1Q15365 356 aaKnown RBP eCLIP17.06■□□□□ 0.32
CTDP1-207ENST00000591598 ZNF280DQ6N043 979 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 FRMD7Q6ZUT3 714 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 TMEM135Q86UB9 458 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 DQX1Q8TE96 717 aaKnown RBP17.06■□□□□ 0.32
CTDP1-207ENST00000591598 FICDQ9BVA6 458 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 GATA5Q9BWX5 397 aaPredicted RBP17.06■□□□□ 0.32
CTDP1-207ENST00000591598 SLC38A7Q9NVC3 462 aa17.06■□□□□ 0.32
CTDP1-207ENST00000591598 RUVBL2Q9Y230 463 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms