RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 CAPN10Q9HC96 672 aa18.48■□□□□ 0.55
CIRBP-227ENST00000590188 TMEM51Q9NW97 253 aa18.48■□□□□ 0.55
CIRBP-227ENST00000590188 AIPL1Q9NZN9 384 aa18.48■□□□□ 0.55
CIRBP-227ENST00000590188 SLCO1B1Q9Y6L6 691 aa18.48■□□□□ 0.55
CIRBP-227ENST00000590188 NYNRINQ9P2P1 1898 aaKnown RBP18.48■□□□□ 0.55
CIRBP-227ENST00000590188 CBX4O00257 560 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 DDX3XO00571 662 aaKnown RBP eCLIP18.47■□□□□ 0.55
CIRBP-227ENST00000590188 TM4SF5O14894 197 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 ATP9BO43861 1147 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 SRCP12931 536 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 ZNF143P52747 638 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-227ENST00000590188 ELAVL3Q14576 367 aaKnown RBP18.47■□□□□ 0.55
CIRBP-227ENST00000590188 TDRD12Q587J7 1177 aaKnown RBP18.47■□□□□ 0.55
CIRBP-227ENST00000590188 PPP1R15BQ5SWA1 713 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 ACBD5Q5T8D3 534 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-227ENST00000590188 RABEPKQ7Z6M1 372 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 AADATQ8N5Z0 425 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 DNASE2BQ8WZ79 361 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 C2orf49Q9BVC5 232 aaPredicted RBP18.47■□□□□ 0.55
CIRBP-227ENST00000590188 SGK2Q9HBY8 427 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 ATP13A1Q9HD20 1204 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 NDFIP2Q9NV92 336 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 ZNF212Q9UDV6 495 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 SUSD2Q9UGT4 822 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 DNAI1Q9UI46 699 aa18.47■□□□□ 0.55
CIRBP-227ENST00000590188 SMAD6O43541 496 aaKnown RBP18.46■□□□□ 0.55
CIRBP-227ENST00000590188 LRIG2O94898 1065 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 PLEKP08567 350 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-227ENST00000590188 PBX1P40424 430 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 PRKCIP41743 596 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 FOXK2Q01167 660 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 SLFN11Q7Z7L1 901 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 MINDY1Q8N5J2 469 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 DCAF4L2Q8NA75 395 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 OR8D1Q8WZ84 308 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 TBC1D31Q96DN5 1066 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 OSBPL2Q9H1P3 480 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 GPATCH2LQ9NWQ4 482 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 PPARGC1AQ9UBK2 798 aaKnown RBP18.46■□□□□ 0.55
CIRBP-227ENST00000590188 SARDHQ9UL12 918 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 SCML1Q9UN30 329 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.46■□□□□ 0.55
CIRBP-227ENST00000590188 ACTL7AQ9Y615 435 aa18.46■□□□□ 0.55
CIRBP-227ENST00000590188 A0A1B0GTW7 788 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 ILVBLA1L0T0 632 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 ARHGAP33O14559 1287 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 BCAT2O15382 392 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-227ENST00000590188 CREB3O43889 395 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 ADH1BP00325 375 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 FTLP02792 175 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-227ENST00000590188 PSMA2P25787 234 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 ACVRL1P37023 503 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 GNA12Q03113 381 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 GRIK2Q13002 908 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 MAMLD1Q13495 774 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 EFHC2Q5JST6 749 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 MANEALQ5VSG8 457 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 PSAPL1Q6NUJ1 521 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 NCEH1Q6PIU2 408 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 LAYNQ6UX15 382 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.45■□□□□ 0.54
CIRBP-227ENST00000590188 USP30Q70CQ3 517 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 TMC6Q7Z403 805 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 OR14C36Q8NHC7 312 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 NTAN1Q96AB6 310 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 BIRC7Q96CA5 298 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 ZNF653Q96CK0 615 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 CNPY3Q9BT09 278 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.45■□□□□ 0.54
CIRBP-227ENST00000590188 EDEM3Q9BZQ6 932 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 TRIM7Q9C029 511 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 TNKS2Q9H2K2 1166 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 MYO1AQ9UBC5 1043 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 CNOT8Q9UFF9 292 aaKnown RBP18.45■□□□□ 0.54
CIRBP-227ENST00000590188 NEU3Q9UQ49 428 aa18.45■□□□□ 0.54
CIRBP-227ENST00000590188 PI4KAP42356 2102 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 PCDH15Q96QU1 1955 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 GIPC1O14908 333 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 KCNK5O95279 499 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 SYPP08247 313 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 C7P10643 843 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 C5AR1P21730 350 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 NOVA1P51513 510 aaKnown RBP18.44■□□□□ 0.54
CIRBP-227ENST00000590188 GALCP54803 685 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 NRG1Q02297 640 aaPredicted RBP18.44■□□□□ 0.54
CIRBP-227ENST00000590188 FIGNQ5HY92 759 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 KIAA0895LQ68EN5 471 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 LEKR1Q6ZMV7 388 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 NLRP14Q86W24 1093 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 ZNF354CQ86Y25 554 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 PIP4K2CQ8TBX8 421 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 XPO4Q9C0E2 1151 aaKnown RBP18.44■□□□□ 0.54
CIRBP-227ENST00000590188 PARVAQ9NVD7 372 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 FZD10Q9ULW2 581 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 HS3ST2Q9Y278 367 aa18.44■□□□□ 0.54
CIRBP-227ENST00000590188 DOCK4Q8N1I0 1966 aa18.43■□□□□ 0.54
CIRBP-227ENST00000590188 LAMA1P25391 3075 aa18.43■□□□□ 0.54
CIRBP-227ENST00000590188 OPHN1O60890 802 aa18.43■□□□□ 0.54
CIRBP-227ENST00000590188 RTN2O75298 545 aa18.43■□□□□ 0.54
CIRBP-227ENST00000590188 RHOQP17081 205 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms