RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 TRPV4Q9HBA0 871 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PCDH18Q9HCL0 1135 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 TRPC7Q9HCX4 862 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 ARGLU1Q9NWB6 273 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 GOLGA6AQ9NYA3 693 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 COX16Q9P0S2 106 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PCYOX1Q9UHG3 505 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 SFMBT1Q9UHJ3 866 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 AMACRQ9UHK6 382 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 UTP11Q9Y3A2 253 aaKnown RBP7.53□□□□□ -1.2
SMAD4-210ENST00000590061 KCNMB2Q9Y691 235 aa7.53□□□□□ -1.2
SMAD4-210ENST00000590061 PRRC2BQ5JSZ5 2229 aaKnown RBP7.52□□□□□ -1.2
SMAD4-210ENST00000590061 LAMA2P24043 3122 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CHD9Q3L8U1 2897 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 MYO16Q9Y6X6 1858 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 IGLV3-10A0A075B6K4 115 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 A0A1B0GVM2 712 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 TCAF2A6NFQ2 919 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ARHGAP42A6NI28 874 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 DRGXA6NNA5 263 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 PER2O15055 1255 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CREB3O43889 395 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 STC2O76061 302 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 LUC7L3O95232 432 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 GJB6O95452 261 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ECEL1O95672 775 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ITGB7P26010 798 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 TARSP26639 723 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 IL1R2P27930 398 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CORO1AP31146 461 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 HOXC13P31276 330 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ARSEP51690 589 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 DRG2P55039 364 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CDH4P55283 916 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 GPLD1P80108 840 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 SLC20A2Q08357 652 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 HYAL1Q12794 435 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 SEMA3BQ13214 749 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 KLF1Q13351 362 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ZNF177Q13360 481 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 AUHQ13825 339 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 DMC1Q14565 340 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 COL19A1Q14993 1142 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 PAFAH1B3Q15102 231 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 SMTNL2Q2TAL5 461 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 C5orf22Q49AR2 442 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 MAP9Q49MG5 647 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 KCNT1Q5JUK3 1230 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ARMC3Q5W041 872 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 TRNP1Q6NT89 227 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 RWDD4Q6NW29 188 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 C8orf74Q6P047 294 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 LLGL2Q6P1M3 1020 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 C16orf46Q6P387 395 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 C1orf228Q6PIY5 440 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 MFSD7Q6UXD7 560 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 GAREM2Q75VX8 874 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 GSTA5Q7RTV2 222 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 GRASPQ7Z6J2 395 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CHSY1Q86X52 802 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 YAF2Q8IY57 180 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CCDC105Q8IYK2 499 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ARFGAP1Q8N6T3 406 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 RTL3Q8N8U3 475 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 MAB21L3Q8N8X9 362 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 SHKBP1Q8TBC3 707 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 COG1Q8WTW3 980 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 DEPDC1BQ8WUY9 529 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CASKIN2Q8WXE0 1202 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 RSAD2Q8WXG1 361 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 RAPGEF5Q92565 580 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 NDRG1Q92597 394 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 SMARCD2Q92925 531 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 TMA16Q96EY4 203 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CAPZA3Q96KX2 299 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 RPRD1AQ96P16 312 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 FOXP3Q9BZS1 431 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 MAGEH1Q9H213 219 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 IGFLR1Q9H665 355 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ZFP14Q9HCL3 533 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 OSER1Q9NX31 292 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 DNMT3BQ9UBC3 853 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 TRHDEQ9UKU6 1024 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CDH7Q9ULB5 785 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 PACSIN2Q9UNF0 486 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ZNF148Q9UQR1 794 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 NR2E1Q9Y466 385 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 CPQQ9Y646 472 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 MTCH2Q9Y6C9 303 aa7.52□□□□□ -1.21
SMAD4-210ENST00000590061 RANBP2P49792 3224 aaKnown RBP7.52□□□□□ -1.21
SMAD4-210ENST00000590061 ILVBLA1L0T0 632 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 C3orf70A6NLC5 250 aaPredicted RBP7.51□□□□□ -1.21
SMAD4-210ENST00000590061 E9PAM4 449 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 PSMD3O43242 534 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 TIMM44O43615 452 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 ERLIN1O75477 346 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 TADA3O75528 432 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 RFPL2O75678 378 aa7.51□□□□□ -1.21
SMAD4-210ENST00000590061 SASH3O75995 380 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms