RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CLDN2P57739 230 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 COG7P83436 770 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 EFEMP1Q12805 493 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 KLRB1Q12918 225 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 MCM6Q14566 821 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 NR0B2Q15466 257 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 NFKBIBQ15653 356 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SETMARQ53H47 684 aaPredicted RBP6.3□□□□□ -1.4
VPS25-204ENST00000589577 LACTB2Q53H82 288 aaPredicted RBP6.3□□□□□ -1.4
VPS25-204ENST00000589577 TPRG1LQ5T0D9 272 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 OR6B2Q6IFH4 312 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SHC4Q6S5L8 630 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 STXBP4Q6ZWJ1 553 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 CCDC186Q7Z3E2 898 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 TMPRSS9Q7Z410 1059 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ABI3BPQ7Z7G0 1075 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 DSG4Q86SJ6 1040 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ACOT1Q86TX2 421 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SFR1Q86XK3 245 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 CBWD2Q8IUF1 395 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 KLK6Q92876 244 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 PTPRN2Q92932 1015 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 ELMO3Q96BJ8 720 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 HVCN1Q96D96 273 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 IFT43Q96FT9 208 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 PPP1R13BQ96KQ4 1090 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 TIGD1Q96MW7 591 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 FGFBP2Q9BYJ0 223 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 PANK2Q9BZ23 570 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 TNMDQ9H2S6 317 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 PCIF1Q9H4Z3 704 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SYNDIG1Q9H7V2 258 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 LMBRD1Q9NUN5 540 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 FAM49BQ9NUQ9 324 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 RMND1Q9NWS8 449 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 CLIC5Q9NZA1 410 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 NCKIPSDQ9NZQ3 722 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 DKK3Q9UBP4 350 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SALL4Q9UJQ4 1053 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 STOML2Q9UJZ1 356 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 SARDHQ9UL12 918 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 VPS4AQ9UN37 437 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 TP53TG5Q9Y2B4 290 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 DAAM1Q9Y4D1 1078 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 LOXL2Q9Y4K0 774 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 PCDHA5Q9Y5H7 936 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 CSNK1G3Q9Y6M4 447 aa6.3□□□□□ -1.4
VPS25-204ENST00000589577 EDDM13A0A1B0GTR0 161 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 TARSL2A2RTX5 802 aaKnown RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 SLC7A4O43246 635 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 AQP9O43315 295 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 RNGTTO60942 597 aaKnown RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 GCATO75600 419 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 STAU1O95793 577 aaKnown RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 LDHAP00338 332 aaKnown RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 IL1BP01584 269 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 CSF2P04141 144 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 JMJD7P0C870 316 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 IDEP14735 1019 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 SLC6A4P31645 630 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 KIF11P52732 1056 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 MYL6P60660 151 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 HNRNPKP61978 463 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS25-204ENST00000589577 TNNC1P63316 161 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 CNTN1Q12860 1018 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 STIM1Q13586 685 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 TRIP4Q15650 581 aaPredicted RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 DUOXA2Q1HG44 320 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 KLHL40Q2TBA0 621 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 ZNF284Q2VY69 593 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 CCDC183Q5T5S1 534 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 L1TD1Q5T7N2 865 aaKnown RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 NUGGCQ68CJ6 796 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 KRBA2Q6ZNG9 492 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 MMS22LQ6ZRQ5 1243 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 WDR49Q8IV35 697 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 FAM114A1Q8IWE2 563 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 CCDC65Q8IXS2 484 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 GPD1LQ8N335 351 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 C12orf29Q8N999 325 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 KDM1BQ8NB78 822 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 WDR48Q8TAF3 677 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 NOC3LQ8WTT2 800 aaKnown RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 RAD54LQ92698 747 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 USP7Q93009 1102 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 NAT6Q93015 286 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 SMARCE1Q969G3 411 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 NKD1Q969G9 470 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 PMEPA1Q969W9 287 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 MYEOVQ96EZ4 313 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 EXOC1Q9NV70 894 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 MARCH2Q9P0N8 246 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 SLCO3A1Q9UIG8 710 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 ERRFI1Q9UJM3 462 aaPredicted RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 PNMA8BQ9ULN7 279 aaPredicted RBP6.29□□□□□ -1.4
VPS25-204ENST00000589577 ERVW-1Q9UQF0 538 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
VPS25-204ENST00000589577 SPTY2D1-AS1A0A0U1RR47 76 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 FAM237AA0A1B0GTK4 181 aa6.28□□□□□ -1.4
VPS25-204ENST00000589577 POM121BA6NF01 834 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms