RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PIK3R6Q5UE93 754 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 FYB2Q5VWT5 728 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 KYAT3Q6YP21 454 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 ZNF683Q8IZ20 524 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS25-203ENST00000589520 ZNF461Q8TAF7 563 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 CERS2Q96G23 380 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SCLYQ96I15 445 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 CELF6Q96J87 481 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 MYRFLQ96LU7 910 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 ZNF558Q96NG5 402 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 ZNF599Q96NL3 588 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 DDX50Q9BQ39 737 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 KIFC1Q9BW19 673 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PRKD2Q9BZL6 878 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SLC25A51Q9H1U9 297 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 CWH43Q9H720 699 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 MANSC1Q9H8J5 431 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PLAC1Q9HBJ0 212 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS25-203ENST00000589520 RBM22Q9NW64 420 aaKnown RBP eCLIP10.6□□□□□ -0.71
VPS25-203ENST00000589520 SYBUQ9NX95 663 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 UXTQ9UBK9 157 aaPredicted RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
VPS25-203ENST00000589520 GRID1Q9ULK0 1009 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SLC27A5Q9Y2P5 690 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PLLPQ9Y342 182 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 SNX10Q9Y5X0 201 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 CDY1Q9Y6F8 540 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PATJQ8NI35 1801 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PTPRDP23468 1912 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 TTC3P53804 2025 aa10.6□□□□□ -0.71
VPS25-203ENST00000589520 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 CXorf49A8MYA2 514 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 TIMM44O43615 452 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 EDF1O60869 148 aaKnown RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 MOCS2O96007 188 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 CLTBP09497 229 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 TROVE2P10155 538 aaKnown RBP eCLIP10.59□□□□□ -0.71
VPS25-203ENST00000589520 PYGBP11216 843 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PAMP19021 973 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 CES1P23141 567 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ETV4P43268 484 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ALDH1A3P47895 512 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SLC11A2P49281 568 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 HARS2P49590 506 aaKnown RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 GATMP50440 423 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PAPOLAP51003 745 aaKnown RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 ATN1P54259 1190 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 IL10RBQ08334 325 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 CCDC15Q0P6D6 951 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PLD1Q13393 1074 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 MTM1Q13496 603 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SLC1A5Q15758 541 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SLC14A2Q15849 920 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 UGP2Q16851 508 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 TRIM60Q495X7 471 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ANKRD20A4Q4UJ75 823 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SPDYAQ5MJ70 313 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 HECTD3Q5T447 861 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SDHAF4Q5VUM1 108 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ATG16L1Q676U5 607 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PDPK2PQ6A1A2 396 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PACS1Q6VY07 963 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 TRPM8Q7Z2W7 1104 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 LCA5Q86VQ0 697 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 TP53INP2Q8IXH6 220 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 CMTR2Q8IYT2 770 aaKnown RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 BBS5Q8N3I7 341 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 MPP5Q8N3R9 675 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 CNTD1Q8N815 330 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 OR52K1Q8NGK4 314 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PPM1EQ8WY54 764 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 CCT6BQ92526 530 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ZNF75CPQ92670 426 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 PLD4Q96BZ4 506 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ZNF689Q96CS4 500 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 TRMT2BQ96GJ1 504 aaKnown RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 TMEM169Q96HH4 297 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SERAC1Q96JX3 654 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 TBL1YQ9BQ87 522 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 MLPHQ9BV36 600 aaPredicted RBP10.59□□□□□ -0.71
VPS25-203ENST00000589520 HERC2P3Q9BVR0 1158 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PPP1R12CQ9BZL4 782 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 KIF9Q9HAQ2 790 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 SMYD2Q9NRG4 433 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 FGFR1OP2Q9NVK5 253 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 TRPM5Q9NZQ8 1165 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 ZFATQ9P243 1243 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PRKAG3Q9UGI9 489 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 PHTF1Q9UMS5 762 aa10.59□□□□□ -0.71
VPS25-203ENST00000589520 FOXO6A8MYZ6 492 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 NT5C1B-RDH14C9J2C7 533 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 F5H5T6 163 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 TLR5O60602 858 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 GLRA3O75311 464 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 RFPL1O75677 317 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 ATP5HO75947 161 aa10.58□□□□□ -0.72
VPS25-203ENST00000589520 BAIAP3O94812 1187 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms