RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	SLC12A8	A0AV02	714 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	LCHN	A4D1U4	455 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	FGF10	O15520	208 aa	Predicted RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ABHD2	P08910	425 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	IMPDH2	P12268	514 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	RING1	Q06587	406 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	SEMA5A	Q13591	1074 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	NUGGC	Q68CJ6	796 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	PSRC1	Q6PGN9	363 aa	Predicted RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	HERC6	Q8IVU3	1022 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZBED8	Q8IZ13	594 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF567	Q8N184	647 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	PDZD8	Q8NEN9	1154 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	EPS8L3	Q8TE67	593 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	DEPDC1B	Q8WUY9	529 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	INPP5D	Q92835	1189 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	TRMT2B	Q96GJ1	504 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CELF6	Q96J87	481 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	BTN2A3P	Q96KV6	586 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	FAM167B	Q9BTA0	163 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CCDC28B	Q9BUN5	200 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CEP41	Q9BYV8	373 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	IGLV3-10	A0A075B6K4	115 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	WASH4P	A8MWX3	477 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	KCNK1	O00180	336 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	OPHN1	O60890	802 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	UNC5C	O95185	931 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	APOE	P02649	317 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CNP	P09543	421 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	MX2	P20592	715 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	PTPN3	P26045	913 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ALDH1A3	P47895	512 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	TUB	P50607	506 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	MTM1	Q13496	603 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	SPDYA	Q5MJ70	313 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	AFMID	Q63HM1	303 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ARHGEF18	Q6ZSZ5	1173 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF534	Q76KX8	674 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CAND1	Q86VP6	1230 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	RBM12B	Q8IXT5	1001 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	HERVK_113	Q902F9	699 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZNF512	Q96ME7	567 aa	Predicted RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	SERPINB12	Q96P63	405 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZBED2	Q9BTP6	218 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	BRD8	Q9H0E9	1235 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CATSPERB	Q9H7T0	1116 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	MPP6	Q9NZW5	540 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	PRKAG3	Q9UGI9	489 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CLUH	O75153	1309 aa		15.74	■□□□□ 0.11
DDX39A-209	ENST00000589318	CHD7	Q9P2D1	2997 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	DENND4C	Q5VZ89	1909 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	APRT	P07741	180 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	HMBS	P08397	361 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	TPSB2	P20231	275 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	MAGEA8	P43361	318 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	GPX6	P59796	221 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	TWF1	Q12792	350 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	AUH	Q13825	339 aa	Known RBP	15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	TPSAB1	Q15661	275 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	ANKMY2	Q8IV38	441 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	RTL3	Q8N8U3	475 aa	Known RBP	15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	ATP6V0D2	Q8N8Y2	350 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	MCU	Q8NE86	351 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	MIPOL1	Q8TD10	442 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	DYDC1	Q8WWB3	177 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	TTC25	Q96NG3	672 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	RAD9A	Q99638	391 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	LRMDA	Q9H2I8	198 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	KLHL14	Q9P2G3	628 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	STK39	Q9UEW8	545 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	VANGL2	Q9ULK5	521 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	STK38L	Q9Y2H1	464 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	HBS1L	Q9Y450	684 aa	Known RBP	15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	INSL5	Q9Y5Q6	135 aa		15.73	■□□□□ 0.11
DDX39A-209	ENST00000589318	COCH	O43405	550 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	COQ9	O75208	318 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	AVIL	O75366	819 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	TCEA3	O75764	348 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	SYN1	P17600	705 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	MAGEA3	P43357	314 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	RASSF2	P50749	326 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	KCNQ1	P51787	676 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	ZBTB17	Q13105	803 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	LONRF1	Q17RB8	773 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	KLHDC10	Q6PID8	442 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	ARHGAP36	Q6ZRI8	547 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	TMEM150A	Q86TG1	271 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	IGDCC3	Q8IVU1	814 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	PDIK1L	Q8N165	341 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	CDK5RAP1	Q96SZ6	601 aa	Known RBP	15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	NOL6	Q9H6R4	1146 aa	Known RBP	15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	SEPT10	Q9P0V9	454 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	PPARGC1A	Q9UBK2	798 aa	Known RBP	15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	SCOC	Q9UIL1	159 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	MAFF	Q9ULX9	164 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	PRRG1	O14668	218 aa		15.72	■□□□□ 0.11
DDX39A-209	ENST00000589318	RASGRF2	O14827	1237 aa		15.72	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms