RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SUMF1Q8NBK3 374 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 OR2T3Q8NH03 318 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 FAM71BQ8TC56 605 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 TSC1Q92574 1164 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 PTPRN2Q92932 1015 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 KLC2Q9H0B6 622 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 PCDH18Q9HCL0 1135 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 ATP13A1Q9HD20 1204 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 LUC7LQ9NQ29 371 aaKnown RBP20.68■□□□□ 0.9
DDX39A-207ENST00000588542 SALL4Q9UJQ4 1053 aa20.68■□□□□ 0.9
DDX39A-207ENST00000588542 ZFHX2Q9C0A1 2572 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-207ENST00000588542 A0A0A6YYK5 440 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-207ENST00000588542 DCLK1O15075 740 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 RPP40O75818 363 aaKnown RBP20.67■□□□□ 0.9
DDX39A-207ENST00000588542 SRCP12931 536 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 VAV1P15498 845 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 ERCC2P18074 760 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 P2RY2P41231 377 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 ARF5P84085 180 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 POLD3Q15054 466 aaPredicted RBP20.67■□□□□ 0.9
DDX39A-207ENST00000588542 MAP7D1Q3KQU3 841 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 LINGO4Q6UY18 593 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 TMPRSS6Q8IU80 811 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 RLN3Q8WXF3 142 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 SEMA4AQ9H3S1 761 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 PRDM16Q9HAZ2 1276 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 CD93Q9NPY3 652 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 INVSQ9Y283 1065 aa20.67■□□□□ 0.9
DDX39A-207ENST00000588542 TNRC6BQ9UPQ9 1833 aaKnown RBP20.67■□□□□ 0.9
DDX39A-207ENST00000588542 EDDM13A0A1B0GTR0 161 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 TARSL2A2RTX5 802 aaKnown RBP20.66■□□□□ 0.9
DDX39A-207ENST00000588542 K7ERQ8 282 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 CBX4O00257 560 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 SMAD6O43541 496 aaKnown RBP20.66■□□□□ 0.9
DDX39A-207ENST00000588542 CD160O95971 181 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 CD48P09326 243 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 IL4RP24394 825 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 ETFBP38117 255 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 PLA2G5P39877 138 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 NNMTP40261 264 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 YBEYP58557 167 aaPredicted RBP20.66■□□□□ 0.9
DDX39A-207ENST00000588542 DLG2Q15700 870 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 USP39Q53GS9 565 aaKnown RBP20.66■□□□□ 0.9
DDX39A-207ENST00000588542 IL31Q6EBC2 164 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 METTL3Q86U44 580 aaKnown RBP20.66■□□□□ 0.9
DDX39A-207ENST00000588542 FRMD1Q8N878 549 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 CSPG4P5Q96PW8 444 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 LACRTQ9GZZ8 138 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 LRRC19Q9H756 370 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 FBRSQ9HAH7 460 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 ETNK2Q9NVF9 386 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 DUSP10Q9Y6W6 482 aa20.66■□□□□ 0.9
DDX39A-207ENST00000588542 RASA4BC9J798 803 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 H3BRJ5 948 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 PJA2O43164 708 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 ZBTB24O43167 697 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 DAPK3O43293 454 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 RASA4O43374 803 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 BUB1BO60566 1050 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 IPO7O95373 1038 aaKnown RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 AMPD1P23109 780 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 GJC1P36383 396 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 ARL4AP40617 200 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 NOP2P46087 812 aaKnown RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 CDH6P55285 790 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 SIM2Q14190 667 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 AFMIDQ63HM1 303 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 KIAA1324Q6UXG2 1013 aaKnown RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 ARHGAP12Q8IWW6 846 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 FAM160A2Q8N612 972 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 ATP11CQ8NB49 1132 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 NKD2Q969F2 451 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 FAM122AQ96E09 287 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 SIPA1Q96FS4 1042 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 HMCESQ96FZ2 354 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 FAM129BQ96TA1 746 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 RSPH9Q9H1X1 276 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 MBD1Q9UIS9 605 aaPredicted RBP20.65■□□□□ 0.9
DDX39A-207ENST00000588542 MFHAS1Q9Y4C4 1052 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 ACTL7AQ9Y615 435 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 SDK1Q7Z5N4 2213 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 SHROOM3Q8TF72 1996 aa20.65■□□□□ 0.9
DDX39A-207ENST00000588542 GPR179Q6PRD1 2367 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 OTOGLQ3ZCN5 2332 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 CXorf51AA0A1B0GTR3 108 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 BTNL10A8MVZ5 291 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 KDELR3O43731 214 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 KRT7P08729 469 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 BCKDHBP21953 392 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 SERPINH1P50454 418 aaKnown RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 VAV2P52735 878 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 NDST2P52849 883 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 RPS14P62263 151 aaKnown RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 SLC20A2Q08357 652 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 MMRN1Q13201 1228 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 SERINC3Q13530 473 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 DPYSL3Q14195 570 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 NUMA1Q14980 2115 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 PARP15Q460N3 678 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 ACCSLQ4AC99 568 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms