RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 LAMTOR5O43504 91 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 PI15O43692 258 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 ATP9BO43861 1147 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TJP3O95049 919 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 KLF8O95600 359 aaPredicted RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 FTCDO95954 541 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 PDGFBP01127 241 aaPredicted RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CD48P09326 243 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TGM2P21980 687 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 NRLP54845 237 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 SEC13P55735 322 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 IL10RBQ08334 325 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 MESP2Q0VG99 397 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 ZNF234Q14588 700 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 FNDC3BQ53EP0 1204 aaKnown RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 EMC10Q5UCC4 262 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 SLC9A4Q6AI14 798 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 MFSD7Q6UXD7 560 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 ZNF354CQ86Y25 554 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CPNE8Q86YQ8 564 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CCDC50Q8IVM0 306 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 C1orf210Q8IVY1 113 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 PLPP6Q8IY26 295 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 BBS5Q8N3I7 341 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 ATP11CQ8NB49 1132 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 DTWD2Q8NBA8 298 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 OR52K2Q8NGK3 314 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 NSMCE1Q8WV22 266 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 ATRIPQ8WXE1 791 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 KRT35Q92764 455 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 FATE1Q969F0 183 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 RNF25Q96BH1 459 aaPredicted RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 ZNF599Q96NL3 588 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CEP44Q9C0F1 390 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 IRF2BPLQ9H1B7 796 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 KCNH6Q9H252 994 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CARD9Q9H257 536 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TMEM245Q9H330 911 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 GOLPH3Q9H4A6 298 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 RBM12Q9NTZ6 932 aaKnown RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 NDFIP2Q9NV92 336 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 SPATA6Q9NWH7 488 aaPredicted RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 TRMT1Q9NXH9 659 aaKnown RBP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 VPS51Q9UID3 782 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 FBXO4Q9UKT5 387 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.27□□□□□ -0.93
CIRBP-218ENST00000588344 STON1Q9Y6Q2 735 aa9.27□□□□□ -0.93
CIRBP-218ENST00000588344 CCDC163A0A0D9SF12 145 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 EDDM13A0A1B0GTR0 161 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PPP1R12AO14974 1030 aaPredicted RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 RNASEH1O60930 286 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 ZMPSTE24O75844 475 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 TUBB4AP04350 444 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 CCNCP24863 283 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 ACVRL1P37023 503 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 SERPINH1P50454 418 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PAPOLAP51003 745 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 RENBPP51606 427 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 GALNT2Q10471 571 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 MTAPQ13126 283 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 MMRN1Q13201 1228 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PDK1Q15118 436 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 CRY1Q16526 586 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PTPRNQ16849 979 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 ZNF528Q3MIS6 628 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 ACCSLQ4AC99 568 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 EGFLAMQ63HQ2 1017 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 NCBP2-AS2Q69YL0 99 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 DSG4Q86SJ6 1040 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 ARHGAP12Q8IWW6 846 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 ALLCQ8N6M5 410 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PQLC3Q8N755 202 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PLD5Q8N7P1 536 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 TXNDC5Q8NBS9 432 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 OR7D4Q8NG98 312 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 CYB5D2Q8WUJ1 264 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 MAIP1Q8WWC4 291 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 P3H4Q92791 437 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 HMCESQ96FZ2 354 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 MRGPRX3Q96LB0 322 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 TSGA13Q96PP4 275 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PSMB7Q99436 277 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 FERMT1Q9BQL6 677 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 FRMD8P1Q9BZ68 369 aaPredicted RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 OSBPL8Q9BZF1 889 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 SLC39A8Q9C0K1 460 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 KLC2Q9H0B6 622 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 NOL6Q9H6R4 1146 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 C11orf16Q9NQ32 467 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 KLHL11Q9NVR0 708 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 AMACRQ9UHK6 382 aa9.26□□□□□ -0.93
CIRBP-218ENST00000588344 IPO11Q9UI26 975 aaKnown RBP9.26□□□□□ -0.93
CIRBP-218ENST00000588344 PYCARDQ9ULZ3 195 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms