RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CMPK2Q5EBM0 449 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 TRNP1Q6NT89 227 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 GRASPQ7Z6J2 395 aaPredicted RBP14.99□□□□□ -0.01
CCDC43-203ENST00000588210 FAF2Q96CS3 445 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 PTCD3Q96EY7 689 aaKnown RBP14.99□□□□□ -0.01
CCDC43-203ENST00000588210 CEP295NLQ96MC4 621 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 RNF157Q96PX1 679 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 B3GNT5Q9BYG0 378 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 MIS12Q9H081 205 aa14.99□□□□□ -0.01
CCDC43-203ENST00000588210 DPYSL4O14531 572 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 CCDC22O60826 627 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 LMNAP02545 664 aaKnown RBP14.98□□□□□ -0.01
CCDC43-203ENST00000588210 TGM2P21980 687 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 MAGEA6P43360 314 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 TTC39BQ5VTQ0 682 aaPredicted RBP14.98□□□□□ -0.01
CCDC43-203ENST00000588210 FAM91A1Q658Y4 838 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 ZC3H18Q86VM9 953 aaKnown RBP14.98□□□□□ -0.01
CCDC43-203ENST00000588210 SLC26A11Q86WA9 606 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 LRRC6Q86X45 466 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 C12orf29Q8N999 325 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 LEMD2Q8NC56 503 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 RXFP2Q8WXD0 754 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 PSMG2Q969U7 264 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 HEXIM2Q96MH2 286 aaKnown RBP14.98□□□□□ -0.01
CCDC43-203ENST00000588210 FAM111AQ96PZ2 611 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 NUDCD1Q96RS6 583 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 MIPEPQ99797 713 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 TMEM120AQ9BXJ8 343 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 DENND2DQ9H6A0 471 aaPredicted RBP14.98□□□□□ -0.01
CCDC43-203ENST00000588210 KCNK13Q9HB14 408 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 USP29Q9HBJ7 922 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 HEY2Q9UBP5 337 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 ZNF180Q9UJW8 692 aa14.98□□□□□ -0.01
CCDC43-203ENST00000588210 A0A0G2JND7 137 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 H7C0C1 242 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 PRPSAP2O60256 369 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 PYGBP11216 843 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 GRIK1P39086 918 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 ATP5OP48047 213 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 KRT72Q14CN4 511 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 PDK2Q15119 407 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 TAF11Q15544 211 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 PABPC1LQ4VXU2 614 aaKnown RBP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 FAM183BPQ6ZVS7 135 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 PAQR9Q6ZVX9 377 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 DNAJB7Q7Z6W7 309 aaPredicted RBP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 KCNV2Q8TDN2 545 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 HNRNPABQ99729 332 aaKnown RBP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 MED10Q9BTT4 135 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 POPDC2Q9HBU9 364 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 HCFC1R1Q9NWW0 138 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 MKS1Q9NXB0 559 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SUFUQ9UMX1 484 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 LRRC42Q9Y546 428 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 PTPRDP23468 1912 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 CLDN5O00501 218 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 RHOP08100 348 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 DLDP09622 509 aaKnown RBP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 BGNP21810 368 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 CCNFP41002 786 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SERPINB4P48594 390 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 KRT81Q14533 505 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 DDR2Q16832 855 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SH3PXD2AQ5TCZ1 1133 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 LCLAT1Q6UWP7 414 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 FAM35AQ86V20 835 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SCN4BQ8IWT1 228 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 ADHFE1Q8IWW8 467 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 TEKT4Q8WW24 435 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 TTC17Q96AE7 1141 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SMARCD1Q96GM5 515 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 NAF1Q96HR8 494 aaKnown RBP14.97□□□□□ -0.01
CCDC43-203ENST00000588210 SPATA17Q96L03 361 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 C8orf48Q96LL4 319 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 CORO1BQ9BR76 489 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 BTBD10Q9BSF8 475 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 ASAH2Q9NR71 780 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 RAB6BQ9NRW1 208 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 FAM49BQ9NUQ9 324 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 ARL8BQ9NVJ2 186 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 KIAA1257Q9ULG3 409 aa14.97□□□□□ -0.01
CCDC43-203ENST00000588210 C5orf42Q9H799 3197 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 BCLAF3A2AJT9 711 aaKnown RBP14.96□□□□□ -0.01
CCDC43-203ENST00000588210 KCNN4O15554 427 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 GSTA2P09210 222 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 CSH1P0DML2 217 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 CSH2P0DML3 217 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 CCDC130P13994 396 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 PDGFRAP16234 1089 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 PRKCHP24723 683 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 GPR15P49685 360 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 EPHA5P54756 1037 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 TAF12Q16514 161 aa14.96□□□□□ -0.01
CCDC43-203ENST00000588210 C15orf59Q2T9L4 293 aaPredicted RBP14.96□□□□□ -0.01
CCDC43-203ENST00000588210 PDZD4Q76G19 769 aaPredicted RBP14.96□□□□□ -0.01
CCDC43-203ENST00000588210 MAP7D3Q8IWC1 876 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms