RNA–Protein interactions for RNA: ENST00000586344.5

RANBP3-206, Transcript of RAN binding protein 3, human

TSL 2

Gene RANBP3, Length 2,554 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-206	ENST00000586344	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	RBM47	A0AV96	593 aa	Known RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	TMEM88B	A6NKF7	163 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	RTN3	O95197	1032 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	SAT1	P21673	171 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	PIK3R1	P27986	724 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	GARS	P41250	739 aa	Known RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	NUDT2	P50583	147 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	SNX16	P57768	344 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CAP1	Q01518	475 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	FOLH1	Q04609	750 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	NAB1	Q13506	487 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	PDK1	Q15118	436 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	TLR1	Q15399	786 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	ANKRD20A4	Q4UJ75	823 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	SPANXN3	Q5MJ09	141 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	TMEM198	Q66K66	360 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CTU1	Q7Z7A3	348 aa	Known RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CLEC14A	Q86T13	490 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	SATL1	Q86VE3	508 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	SNX32	Q86XE0	403 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CRYBG2	Q8N1P7	616 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	RNF148	Q8N7C7	305 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	ISL2	Q96A47	359 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CHRAC1	Q9NRG0	131 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	PIGV	Q9NUD9	493 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	IGSF9	Q9P2J2	1179 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	VANGL2	Q9ULK5	521 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CDY2A	Q9Y6F7	541 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CDY1	Q9Y6F8	540 aa		13.6	□□□□□ -0.23
RANBP3-206	ENST00000586344	CIT	O14578	2027 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344		M0QYT0	321 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TK2	O00142	265 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	ZBTB24	O43167	697 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	FBXO21	O94952	628 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	PGM3	O95394	542 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	JUN	P05412	331 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	MMP3	P08254	477 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	SPR	P35270	261 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	SERPINB8	P50452	374 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	GRM2	Q14416	872 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	LSM12	Q3MHD2	195 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	UGT2A3	Q6UWM9	527 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TMEM135	Q86UB9	458 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	DNAAF3	Q8N9W5	541 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	URGCP	Q8TCY9	931 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	MARK4	Q96L34	752 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	RTKN	Q9BST9	563 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	NAT9	Q9BTE0	207 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	LRRC40	Q9H9A6	602 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	NMRAL1	Q9HBL8	299 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TCF7L2	Q9NQB0	619 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	UBP1	Q9NZI7	540 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	ANKRD33B	A6NCL7	494 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344		H3BRB1	525 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	EEF2K	O00418	725 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	CASQ2	O14958	399 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	DCLK1	O15075	740 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TRIM13	O60858	407 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	SBK3	P0C264	359 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	XRCC1	P18887	633 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	ACAT1	P24752	427 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	CD68	P34810	354 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	ALDH1A3	P47895	512 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	GLRB	P48167	497 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	PKNOX1	P55347	436 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	DPYS	Q14117	519 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	GK3P	Q14409	553 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	PPP2R5D	Q14738	602 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TMC7	Q7Z402	723 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	OSTM1	Q86WC4	334 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TMEM151A	Q8N4L1	468 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	BEST2	Q8NFU1	509 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	NCSTN	Q92542	709 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	CENPK	Q9BS16	269 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	MLPH	Q9BV36	600 aa	Predicted RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	UNK	Q9C0B0	810 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	FAM96A	Q9H5X1	160 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	TUT1	Q9H6E5	874 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	IARS2	Q9NSE4	1012 aa	Known RBP	13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	UBAP1	Q9NZ09	502 aa		13.59	□□□□□ -0.23
RANBP3-206	ENST00000586344	STX16-NPEPL1	H3BU86	382 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	RECQL4	O94761	1208 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	PIM1	P11309	404 aa	Predicted RBP	13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	ERCC2	P18074	760 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	NUMB	P49757	651 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	THOP1	P52888	689 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	FBXO47	Q5MNV8	452 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	PSTK	Q8IV42	348 aa	Known RBP	13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	NPW	Q8N729	165 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	LRRC52	Q8N7C0	313 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	USP13	Q92995	863 aa	Predicted RBP	13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	HSFY1	Q96LI6	401 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	CDRT15	Q96T59	188 aa		13.58	□□□□□ -0.24
RANBP3-206	ENST00000586344	NUF2	Q9BZD4	464 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms