RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TXNDC11Q6PKC3 985 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 TPGS1Q6ZTW0 290 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 GSTA5Q7RTV2 222 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 HOOK3Q86VS8 718 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 ETFBKMTQ8IXQ9 262 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 UBALD2Q8IYN6 164 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 PHTF2Q8N3S3 785 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 PQLC3Q8N755 202 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 ATP2A3Q93084 1043 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 CAVIN3Q969G5 261 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 SNF8Q96H20 258 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 OLFM3Q96PB7 478 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 QKIQ96PU8 341 aaKnown RBP eCLIP12.96□□□□□ -0.338e-15■■■■■ 49.6
VMP1-202ENST00000585847 EPB41L5Q9HCM4 733 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 HEBP1Q9NRV9 189 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 ZNF212Q9UDV6 495 aa12.96□□□□□ -0.33
VMP1-202ENST00000585847 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.96□□□□□ -0.33
VMP1-202ENST00000585847 V9GYY5 206 aaPredicted RBP12.96□□□□□ -0.33
VMP1-202ENST00000585847 IGLV3-10A0A075B6K4 115 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 TCRBV7S2A1N4TA0A589 114 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 DRGXA6NNA5 263 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 DCLK1O15075 740 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 TRIM24O15164 1050 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 CD48P09326 243 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 RHOQP17081 205 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 EPHB2P29323 1055 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 CHKAP35790 457 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ETFBP38117 255 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 SLC6A11P48066 632 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 MAPKAPK2P49137 400 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 VSNL1P62760 191 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ITPRIPL2Q3MIP1 535 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 SLC44A4Q53GD3 710 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ALFQ53S48 1182 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 SLC45A4Q5BKX6 768 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 RABGAP1LQ5R372 815 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 TMCO4Q5TGY1 634 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ASTLQ6HA08 431 aaPredicted RBP12.95□□□□□ -0.34
VMP1-202ENST00000585847 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ADAT2Q7Z6V5 191 aaKnown RBP12.95□□□□□ -0.34
VMP1-202ENST00000585847 CHSY1Q86X52 802 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 CIR1Q86X95 450 aaPredicted RBP12.95□□□□□ -0.34
VMP1-202ENST00000585847 LGI2Q8N0V4 545 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 CFAP52Q8N1V2 620 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ZNF557Q8N988 423 aaPredicted RBP12.95□□□□□ -0.34
VMP1-202ENST00000585847 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 C1orf54Q8WWF1 131 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 PNKPQ96T60 521 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 MFSD1Q9H3U5 465 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 VIPAS39Q9H9C1 493 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 FBRSL1Q9HCM7 1045 aaKnown RBP12.95□□□□□ -0.34
VMP1-202ENST00000585847 PLK2Q9NYY3 685 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 PAK5Q9P286 719 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 ASIC3Q9UHC3 531 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 DMGDHQ9UI17 866 aaKnown RBP12.95□□□□□ -0.34
VMP1-202ENST00000585847 FBXO10Q9UK96 956 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 VANGL2Q9ULK5 521 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 SHOC2Q9UQ13 582 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 NUP205Q92621 2012 aa12.95□□□□□ -0.34
VMP1-202ENST00000585847 CXorf51AA0A1B0GTR3 108 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 TYW5A2RUC4 315 aaKnown RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 ANTXRLA6NF34 631 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 E9PAM4 449 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 GALR2O43603 387 aaPredicted RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 CNTN5O94779 1100 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 LRIG2O94898 1065 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 PDGFBP01127 241 aaPredicted RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 CISD3P0C7P0 127 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 ADH5P11766 374 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 TYRP14679 529 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 GOT1P17174 413 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 CTHP32929 405 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 NDST2P52849 883 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 MORF4L2Q15014 288 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 NCBP2-AS2Q69YL0 99 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 TIGD7Q6NT04 549 aaPredicted RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 PPP1R21Q6ZMI0 780 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 ANKS1BQ7Z6G8 1248 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 ZNF687Q8N1G0 1237 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 CPA6Q8N4T0 437 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 MREGQ8N565 214 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 OR52K2Q8NGK3 314 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 TFB1MQ8WVM0 346 aaKnown RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 EZH1Q92800 747 aaPredicted RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 HDAC11Q96DB2 347 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 TMA16Q96EY4 203 aaKnown RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 HERPUD2Q9BSE4 406 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 ZYG11BQ9C0D3 744 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 DNPEPQ9ULA0 475 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 R3HDM2Q9Y2K5 976 aaKnown RBP12.94□□□□□ -0.34
VMP1-202ENST00000585847 NEU2Q9Y3R4 380 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 F5P12259 2224 aa12.94□□□□□ -0.34
VMP1-202ENST00000585847 ATG2BQ96BY7 2078 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 NEDD8-MDP1E9PL57 170 aa12.93□□□□□ -0.34
VMP1-202ENST00000585847 F5H5T6 163 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms