RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 KLHL38Q2WGJ6 581 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 ANO4Q32M45 955 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 BBS9Q3SYG4 887 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 TEX44Q53QW1 395 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 TNFAIP8L3Q5GJ75 292 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 ANKRD22Q5VYY1 191 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 AFMIDQ63HM1 303 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 CYS1Q717R9 158 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 UMODL1-AS1Q8N2C9 162 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 KREMEN2Q8NCW0 462 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 PLD4Q96BZ4 506 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 C9orf72Q96LT7 481 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 ZNF512Q96ME7 567 aaPredicted RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 NECTIN4Q96NY8 510 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 DDX50Q9BQ39 737 aaKnown RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 NAT9Q9BTE0 207 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 ZYG11BQ9C0D3 744 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 VPS37BQ9H9H4 285 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 LRRC4CQ9HCJ2 640 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 TMEM248Q9NWD8 314 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 LGALS13Q9UHV8 139 aa10.64□□□□□ -0.71
LIG3-203ENST00000585370 MAGED2Q9UNF1 606 aaPredicted RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
LIG3-203ENST00000585370 PTPRZ1P23471 2315 aaPredicted RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 TCRBV7S3A2A0A539 114 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 ARHGAP42A6NI28 874 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 SRRM3A6NNA2 597 aaPredicted RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 SOAT2O75908 522 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 TMEM63AO94886 807 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 MAP3K6O95382 1288 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 SEC24AO95486 1093 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 METTL18O95568 372 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 APRTP07741 180 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 VAV1P15498 845 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 HMGA1P17096 107 aaKnown RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 PFKLP17858 780 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 PTPN3P26045 913 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 AVPR2P30518 371 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 MAPKAPK2P49137 400 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 HARS2P49590 506 aaKnown RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 PTPN5P54829 565 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 YBEYP58557 167 aaPredicted RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 PPP2R2AP63151 447 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 IFI35P80217 286 aaPredicted RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 WASHC5Q12768 1159 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 C5orf22Q49AR2 442 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 MS4A13Q5J8X5 152 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 FNBP1LQ5T0N5 605 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 RARS2Q5T160 578 aaKnown RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 ARMC3Q5W041 872 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 KCTD16Q68DU8 428 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 LRRC8BQ6P9F7 803 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 C3orf62Q6ZUJ4 267 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 CCDC149Q6ZUS6 474 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 B4GALNT4Q76KP1 1039 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 ZNF567Q8N184 647 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 ATPAF2Q8N5M1 289 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 FBXO36Q8NEA4 188 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 GPR152Q8TDT2 470 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 TEKT5Q96M29 485 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 RIPOR3Q96MK2 946 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 PRRX2Q99811 253 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 EMILIN2Q9BXX0 1053 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 NACA2Q9H009 215 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 DNAJC17Q9NVM6 304 aaKnown RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 SENP1Q9P0U3 644 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 KLHL8Q9P2G9 620 aaPredicted RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 NUDT5Q9UKK9 219 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 MFHAS1Q9Y4C4 1052 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 YIPF1Q9Y548 306 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 ACTL7BQ9Y614 415 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 TEX264Q9Y6I9 313 aa10.63□□□□□ -0.71
LIG3-203ENST00000585370 RIF1Q5UIP0 2472 aaKnown RBP10.63□□□□□ -0.71
LIG3-203ENST00000585370 KMT2EQ8IZD2 1858 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 EXOC1LA0A1B0GW35 172 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 SDR42E2A6NKP2 422 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 GOLGA8MH3BSY2 632 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 MATN3O15232 486 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 LATS1O95835 1130 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 MOCS2O96007 188 aaPredicted RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 ASGR2P07307 311 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 ADH1AP07327 375 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 STX2P32856 288 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 MTHFRP42898 656 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 MAGEA3P43357 314 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 IFNAR2P48551 515 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 GEMIN4P57678 1058 aaKnown RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 MAGOHP61326 146 aaKnown RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 ATAT1Q5SQI0 421 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 PIK3R6Q5UE93 754 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 DNAJB7Q7Z6W7 309 aaPredicted RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 CAND1Q86VP6 1230 aaKnown RBP10.62□□□□□ -0.71
LIG3-203ENST00000585370 NLRP14Q86W24 1093 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 MIB1Q86YT6 1006 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 ZNF683Q8IZ20 524 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 PSMG2Q969U7 264 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 CYTH2Q99418 400 aa10.62□□□□□ -0.71
LIG3-203ENST00000585370 PRMT1Q99873 361 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms