RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SLC6A3Q01959 620 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 ARHGAP44Q17R89 818 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 SETMARQ53H47 684 aaPredicted RBP15.42■□□□□ 0.06
VAPA-209ENST00000585042 BRMS1LQ5PSV4 323 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 PRAMEF14Q5SWL7 426 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 C6orf118Q5T5N4 469 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 SFMBT2Q5VUG0 894 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 OLFML1Q6UWY5 402 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 SH2D3CQ8N5H7 860 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 EID2Q8N6I1 236 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
VAPA-209ENST00000585042 HNRNPLLQ8WVV9 542 aaKnown RBP15.42■□□□□ 0.06
VAPA-209ENST00000585042 PGAP3Q96FM1 320 aaPredicted RBP15.42■□□□□ 0.06
VAPA-209ENST00000585042 C1orf74Q96LT6 269 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 KIAA1468Q9P260 1216 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 SARDHQ9UL12 918 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 HS3ST2Q9Y278 367 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 PAXBP1Q9Y5B6 917 aa15.42■□□□□ 0.06
VAPA-209ENST00000585042 TP53BP1Q12888 1972 aaPredicted RBP15.42■□□□□ 0.06
VAPA-209ENST00000585042 FAM149AA5PLN7 773 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 RTN2O75298 545 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 PAGE1O75459 146 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 DAB1O75553 588 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 CKMT2P17540 419 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 SCNN1AP37088 669 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 ACADVLP49748 655 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 PPP2CBP62714 309 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 PPP2CAP67775 309 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 CCDC157Q569K6 752 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 AGBL4Q5VU57 503 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 OR6B2Q6IFH4 312 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 GJB7Q6PEY0 223 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 KANSL1Q7Z3B3 1105 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 SETD3Q86TU7 594 aaPredicted RBP15.41■□□□□ 0.06
VAPA-209ENST00000585042 CIR1Q86X95 450 aaPredicted RBP15.41■□□□□ 0.06
VAPA-209ENST00000585042 SPATS2Q86XZ4 545 aaKnown RBP15.41■□□□□ 0.06
VAPA-209ENST00000585042 TMIEQ8NEW7 156 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 PIP4K2CQ8TBX8 421 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 NT5C3BQ969T7 300 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 NXPE2Q96DL1 559 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 CCDC114Q96M63 670 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 C2orf49Q9BVC5 232 aaPredicted RBP15.41■□□□□ 0.06
VAPA-209ENST00000585042 NRSN2Q9GZP1 204 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 WDCPQ9H6R7 721 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 VPS28Q9UK41 221 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 VANGL2Q9ULK5 521 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 HS3ST4Q9Y661 456 aa15.41■□□□□ 0.06
VAPA-209ENST00000585042 NYNRINQ9P2P1 1898 aaKnown RBP15.41■□□□□ 0.06
VAPA-209ENST00000585042 SYNJ2BP-COX16A0A087WUM0 186 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 DRGXA6NNA5 263 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 M0QYT0 321 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 CXCR3P49682 368 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 CLCN6P51797 869 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 CNTN1Q12860 1018 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 BNIP3Q12983 259 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 NME3Q13232 169 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 RTP5Q14D33 572 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 SOWAHCQ53LP3 525 aaPredicted RBP15.4■□□□□ 0.06
VAPA-209ENST00000585042 FBXL19Q6PCT2 694 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 FAM183BPQ6ZVS7 135 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 MARCH9Q86YJ5 346 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 IRF2BP1Q8IU81 584 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 FAM174AQ8TBP5 190 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 NPY6RQ99463 290 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 ARHGEF38Q9NXL2 777 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 COX16Q9P0S2 106 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 STAP1Q9ULZ2 295 aa15.4■□□□□ 0.06
VAPA-209ENST00000585042 FOXN3O00409 490 aaPredicted RBP15.39■□□□□ 0.05
VAPA-209ENST00000585042 PLK4O00444 970 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 GADD45BO75293 160 aaPredicted RBP15.39■□□□□ 0.05
VAPA-209ENST00000585042 GRAP2O75791 330 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 ERBB2P04626 1255 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 SRCP12931 536 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 ACP1P24666 158 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 CLCN1P35523 988 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 GABRB2P47870 512 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 E2F1Q01094 437 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 CENPCQ03188 943 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 SLC20A2Q08357 652 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 DNAJC3Q13217 504 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 LRRC31Q6UY01 552 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 Q6ZVU0 165 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 CREBRFQ8IUR6 639 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 FAM71AQ8IYT1 594 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 MLKLQ8NB16 471 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 OR52K2Q8NGK3 314 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 RFFLQ8WZ73 363 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 KLHDC7BQ96G42 594 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 SIK2Q9H0K1 926 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 MUC3BQ9H195 1237 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 SYNCQ9H7C4 482 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.39■□□□□ 0.05
VAPA-209ENST00000585042 IGSF10Q6WRI0 2623 aa15.39■□□□□ 0.05
VAPA-209ENST00000585042 FASNP49327 2511 aaKnown RBP15.39■□□□□ 0.05
VAPA-209ENST00000585042 CXorf51AA0A1B0GTR3 108 aa15.38■□□□□ 0.05
VAPA-209ENST00000585042 PRNPP04156 253 aa15.38■□□□□ 0.05
VAPA-209ENST00000585042 MAT2AP31153 395 aaKnown RBP15.38■□□□□ 0.05
VAPA-209ENST00000585042 CHRNA3P32297 505 aa15.38■□□□□ 0.05
VAPA-209ENST00000585042 CDH5P33151 784 aaPredicted RBP15.38■□□□□ 0.05
VAPA-209ENST00000585042 METAP1P53582 386 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms