RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	TBC1D3E	A0A087X179	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3K	A0A087X1G2	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186		A0A0D9SEW6	157 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	LRRC10B	A6NIK2	292 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3L	B9A6J9	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186		K7ERQ8	282 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	KCNK3	O14649	394 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	MT-CO1	P00395	513 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3H	P0C7X1	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	KRT3	P12035	628 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ADPRH	P54922	357 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SHC2	P98077	582 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CLEC16A	Q2KHT3	1053 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ARL13B	Q3SXY8	428 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CCDC14	Q49A88	953 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3G	Q6DHY5	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3C	Q6IPX1	549 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ARC	Q7LC44	396 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	BNIPL	Q7Z465	357 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	DRC7	Q8IY82	874 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SH2D3C	Q8N5H7	860 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SLC6A18	Q96N87	628 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PSMB7	Q99436	277 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	AGPAT1	Q99943	283 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SELENOO	Q9BVL4	669 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ZYG11B	Q9C0D3	744 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TM7SF3	Q9NS93	570 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ADAMTS1	Q9UHI8	967 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	VPS51	Q9UID3	782 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SARDH	Q9UL12	918 aa		13.97	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SPEG	Q15772	3267 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CHD8	Q9HCK8	2581 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	IGLV3-10	A0A075B6K4	115 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186		A0A1W2PPC4	97 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C2CD4B	A6NLJ0	364 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C1QTNF3-AMACR	E9PGA6	284 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CBX4	O00257	560 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RTN2	O75298	545 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ENDOD1	O94919	500 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	CALB1	P05937	261 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SRC	P12931	536 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GLDC	P23378	1020 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RRM1	P23921	792 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RFC1	P35251	1148 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	GRIA4	P48058	902 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	C21orf59	P57076	290 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PTP4A2	Q12974	167 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	TRIP6	Q15654	476 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	KCNT1	Q5JUK3	1230 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FAM46C	Q5VWP2	391 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	RWDD4	Q6NW29	188 aa	Known RBP	13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR7D4	Q8NG98	312 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FAM172A	Q8WUF8	416 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	ACE2	Q9BYF1	805 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OSGEP	Q9NPF4	335 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	AASDHPPT	Q9NRN7	309 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	OR12D3	Q9UGF7	316 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	PPM1H	Q9ULR3	514 aa		13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.96	□□□□□ -0.17
CDK5RAP3-233	ENST00000584186	SMTNL1	A8MU46	457 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MCF2L	O15068	1137 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TEX33	O43247	280 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SMAD6	O43541	496 aa	Known RBP	13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	HYAL3	O43820	417 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ADRA1B	P35368	520 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DRD3	P35462	400 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	VASP	P50552	380 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RACK1	P63244	317 aa	Known RBP	13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CNTN1	Q12860	1018 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	HNRNPD	Q14103	355 aa	Known RBP	13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DNAJC24	Q6P3W2	148 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PHF13	Q86YI8	300 aa	Predicted RBP	13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DCAF4L2	Q8NA75	395 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PIP4K2C	Q8TBX8	421 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SERAC1	Q96JX3	654 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCDC114	Q96M63	670 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ORAI3	Q9BRQ5	295 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SCNM1	Q9BWG6	230 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TNKS2	Q9H2K2	1166 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	EBF2	Q9HAK2	575 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ATP13A1	Q9HD20	1204 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	HS3ST2	Q9Y278	367 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ACACB	O00763	2458 aa		13.95	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ILVBL	A1L0T0	632 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ANKRD62	A6NC57	917 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	KPNA3	O00505	521 aa	Predicted RBP	13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ALOX15B	O15296	676 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCDC172	P0C7W6	258 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FER	P16591	822 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GPD1	P21695	349 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MAT2A	P31153	395 aa	Known RBP	13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CHRNA3	P32297	505 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PTPN9	P43378	593 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RECQL	P46063	649 aa	Predicted RBP	13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DNA2	P51530	1060 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCR5	P51681	352 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PPP2CB	P62714	309 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms