RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 OTUD4Q01804 1114 aaKnown RBP11.92□□□□□ -0.5
CDRT1-207ENST00000583965 KDSRQ06136 332 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 IL10RBQ08334 325 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 SLC20A2Q08357 652 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 CCNG2Q16589 344 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 GEN1Q17RS7 908 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 FUT11Q495W5 492 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 IL31Q6EBC2 164 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 TIGD7Q6NT04 549 aaPredicted RBP11.92□□□□□ -0.5
CDRT1-207ENST00000583965 DRICH1Q6PGQ1 229 aaPredicted RBP11.92□□□□□ -0.5
CDRT1-207ENST00000583965 NPNTQ6UXI9 565 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 TPRG1Q6ZUI0 275 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
CDRT1-207ENST00000583965 ADIPOR2Q86V24 386 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 ZNF354CQ86Y25 554 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 OR7D4Q8NG98 312 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 CCDC26Q8TAB7 109 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 ACTL9Q8TC94 416 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 UCMAQ8WVF2 138 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 TTC17Q96AE7 1141 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 HAUS1Q96CS2 278 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 CAPZA3Q96KX2 299 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 SPON2Q9BUD6 331 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 ARHGEF3Q9NR81 526 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 FBXL21Q9UKT6 434 aa11.92□□□□□ -0.5
CDRT1-207ENST00000583965 INTS6Q9UL03 887 aaKnown RBP11.92□□□□□ -0.5
CDRT1-207ENST00000583965 TBC1D3BA6NDS4 549 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 TRIM24O15164 1050 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 MTSS1O43312 755 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 MAFKO60675 156 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 PRAMEF11O60813 436 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 EIF3EP60228 445 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 ECT2LQ008S8 904 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 CKAP4Q07065 602 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 PPIDQ08752 370 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 GRSF1Q12849 480 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 SIX1Q15475 284 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 TMEM196Q5HYL7 178 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 MBLAC2Q68D91 279 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 RETSATQ6NUM9 610 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 TXNDC11Q6PKC3 985 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 ZNF852Q6ZMS4 543 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 ADAT2Q7Z6V5 191 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 TP53INP2Q8IXH6 220 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 APCDD1Q8J025 514 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 C12orf50Q8NA57 414 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 TFB1MQ8WVM0 346 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 CASKIN2Q8WXE0 1202 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 FAM3CQ92520 227 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 ZNF599Q96NL3 588 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 UHRF1Q96T88 793 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 FERMT1Q9BQL6 677 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 SP110Q9HB58 689 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 CD320Q9NPF0 282 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 SAE1Q9UBE0 346 aaPredicted RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 IPO11Q9UI26 975 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 VPS51Q9UID3 782 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 MUTYHQ9UIF7 546 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 SLC25A13Q9UJS0 675 aa11.91□□□□□ -0.5
CDRT1-207ENST00000583965 R3HDM2Q9Y2K5 976 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 MRPS17Q9Y2R5 130 aaKnown RBP11.91□□□□□ -0.5
CDRT1-207ENST00000583965 BCLAF3A2AJT9 711 aaKnown RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 H7C0C1 242 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CCDC188H7C350 402 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CBX4O00257 560 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 KRIT1O00522 736 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 NPC1O15118 1278 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 LIASO43766 372 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 ZMPSTE24O75844 475 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 SRPRAP08240 638 aaKnown RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 DLDP09622 509 aaKnown RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 RBP3P10745 1247 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 ATP5OP48047 213 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 STARD6P59095 220 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 TUBB4BP68371 445 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 ZXDAP98168 799 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 BYSLQ13895 437 aaKnown RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 RFTN1Q14699 578 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 PRKD1Q15139 912 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 PON2Q15165 354 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CYP1B1Q16678 543 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 FBXO43Q4G163 708 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 INO80DQ53TQ3 878 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 SLC45A4Q5BKX6 768 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 IER5LQ5T953 404 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 TMEM215Q68D42 235 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 NAIF1Q69YI7 327 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 ZNF572Q7Z3I7 529 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 ZC3H18Q86VM9 953 aaKnown RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CDKL3Q8IVW4 592 aaPredicted RBP11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CCDC13Q8IYE1 715 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CEP112Q8N8E3 955 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 KDM1BQ8NB78 822 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 CCNYQ8ND76 341 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 SLC35B2Q8TB61 432 aa11.9□□□□□ -0.5
CDRT1-207ENST00000583965 NSMCE1Q8WV22 266 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms