RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ELOA3CA0A087WX78 387 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3IA0A087WXS9 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3EA0A087X179 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3KA0A087X1G2 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3FA6NER0 549 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 A6NJY4 79 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ELOA3DA6NLF2 546 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 YJEFN3A6XGL0 299 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TMEM229AB2RXF0 380 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3LB9A6J9 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 E7ENQ6 273 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 XPO1O14980 1071 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 MID1O15344 667 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 IRAK2O43187 625 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ACSL4O60488 711 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBL1XO60907 577 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 MT-CO3P00414 261 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ASLP04424 464 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SRPRAP08240 638 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3HP0C7X1 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 FAM157BP0CG42 384 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TRIM49P0CI25 452 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TRIM49CP0CI26 452 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 KRT13P13646 458 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 GOT1P17174 413 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 C5AR1P21730 350 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ACP1P24666 158 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 EPHA8P29322 1005 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 SLC6A4P31645 630 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 GTF2H1P32780 548 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 PSMC2P35998 433 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 SLC11A2P49281 568 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ENPEPQ07075 957 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 CCDC173Q0VFZ6 552 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ADAM9Q13443 819 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 CST6Q15828 149 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 NFIL3Q16649 462 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D25Q3MII6 688 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ELOA3BQ3SY89 546 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TAF1BQ53T94 588 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 SFMBT2Q5VUG0 894 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 KRT39Q6A163 491 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3GQ6DHY5 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3CQ6IPX1 549 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 RFWD3Q6PCD5 774 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SND1Q7KZF4 910 aaKnown RBP eCLIP5.52□□□□□ -1.534e-15■□□□□ 9.2
VAPA-207ENST00000583879 KANSL1Q7Z3B3 1105 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 PRPF39Q86UA1 669 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 ERICH1Q86X53 443 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SPATS2Q86XZ4 545 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 UNC45BQ8IWX7 931 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 DHX40Q8IX18 779 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 GRAMD1CQ8IYS0 662 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TBC1D3Q8IZP1 549 aaPredicted RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 LSMEM2Q8N112 164 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SCML4Q8N228 414 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 OXR1Q8N573 874 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 DCBLD1Q8N8Z6 715 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 MFSD2AQ8NA29 543 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ZNF248Q8NDW4 579 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ELOA3Q8NG57 546 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 OR14C36Q8NHC7 312 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 WFDC5Q8TCV5 224 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 KCTD13Q8WZ19 329 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 EDEM1Q92611 657 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SEMA4DQ92854 862 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 PAGE5Q96GU1 130 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SERAC1Q96JX3 654 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 MRGPRX3Q96LB0 322 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 IPO9Q96P70 1041 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 FAM129BQ96TA1 746 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 KRTAP4-12Q9BQ66 201 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 TMEM8AQ9HCN3 771 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 CNGB3Q9NQW8 809 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 EXOC1Q9NV70 894 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 RAB20Q9NX57 234 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 STIM2Q9P246 746 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ARHGAP20Q9P2F6 1191 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SERTAD1Q9UHV2 236 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 SLCO3A1Q9UIG8 710 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 INTS6Q9UL03 887 aaKnown RBP5.52□□□□□ -1.53
VAPA-207ENST00000583879 PCDHA7Q9UN72 937 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 ERVW-1Q9UQF0 538 aa5.52□□□□□ -1.53
VAPA-207ENST00000583879 PTPRBP23467 1997 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 IGSF10Q6WRI0 2623 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 CYSRT1A8MQ03 144 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 TTC34A8MYJ7 566 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 B8ZZF3 427 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 CDK2AP1O14519 115 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 MSI1O43347 362 aaKnown RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 LATO43561 262 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 MAGEC1O60732 1142 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 IGLV3-27P01718 113 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 VDRP11473 427 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 NR2F2P24468 414 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 RPL13P26373 211 aaKnown RBP5.51□□□□□ -1.53
VAPA-207ENST00000583879 CSKP41240 450 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ME1P48163 572 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 ADPRHP54922 357 aa5.51□□□□□ -1.53
VAPA-207ENST00000583879 UCNP55089 124 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms