RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 ST8SIA4Q92187 359 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 NR4A3Q92570 626 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 HDAC2Q92769 488 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 P2RY11Q96G91 374 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 MASTLQ96GX5 879 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 THOC3Q96J01 351 aaKnown RBP4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 CD180Q99467 661 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 MACROD1Q9BQ69 325 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 ABHD14AQ9BUJ0 271 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 CLPBQ9H078 707 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 TAOK3Q9H2K8 898 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 RMI1Q9H9A7 625 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 PREBQ9HCU5 417 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 SLC22A11Q9NSA0 550 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 THAP1Q9NVV9 213 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 PPP1R14DQ9NXH3 145 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 SLC25A13Q9UJS0 675 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 ARHGAP26Q9UNA1 814 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 HEMK1Q9Y5R4 338 aaPredicted RBP4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 EMSYQ7Z589 1322 aa4.09□□□□□ -1.75
SMCHD1-209ENST00000583441 TCF20Q9UGU0 1960 aaKnown RBP4.09□□□□□ -1.76
SMCHD1-209ENST00000583441 GOLGA6L10A0A0M3HER8 536 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 SMIM35A0A1B0GVV1 85 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TMEM247A6NEH6 219 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 B4E171 279 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 MCIDASD6RGH6 385 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TULP3O75386 442 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ALDOCP09972 364 aaKnown RBP4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 CYP4B1P13584 511 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 AKR1A1P14550 325 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 HOXB9P17482 250 aaPredicted RBP4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TNFAIP3P21580 790 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 PRPH2P23942 346 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 PRKCHP24723 683 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TACR3P29371 465 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TSPAN7P41732 249 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 STAT1P42224 750 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ZNF84P51523 738 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 B4GALNT1Q00973 533 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 LMOD3Q0VAK6 560 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 SLC14A1Q13336 389 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 GAB1Q13480 694 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ANXA2RQ3ZCQ2 193 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 LRRC24Q50LG9 513 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 HYIQ5T013 277 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 RANBP10Q6VN20 620 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 PCGF5Q86SE9 256 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ARMC8Q8IUR7 673 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 SCN4BQ8IWT1 228 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 FAM47BQ8NA70 645 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ZCCHC10Q8TBK6 192 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 RFFLQ8WZ73 363 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 NCSTNQ92542 709 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 STAMQ92783 540 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 KCNJ9Q92806 393 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 GPR78Q96P69 363 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TRIM31Q9BZY9 425 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ARHGAP39Q9C0H5 1083 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 STN1Q9H668 368 aaKnown RBP4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 IRAK4Q9NWZ3 460 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 TRNAU1APQ9NX07 287 aaKnown RBP4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 ALKBH4Q9NXW9 302 aa4.08□□□□□ -1.76
SMCHD1-209ENST00000583441 GAGE10A6NGK3 116 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 NPIPB13A6NJU9 1138 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 NPIPB5A8MRT5 1133 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 NPIPB4C9JG80 1138 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 F5H0A9 414 aaPredicted RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 GTPBP1O00178 669 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 TSPAN4O14817 238 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 DHX16O60231 1041 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 HBP1O60381 514 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 BAIAP3O94812 1187 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 TMEM63AO94886 807 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 KAT7O95251 611 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 HLA-DQA2P01906 255 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 TGFB3P10600 412 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 PKMP14618 531 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 GSTM2P28161 218 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ARHGAP25P42331 645 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 HTR6P50406 440 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 MVDP53602 400 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ADPRHP54922 357 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 RPP30P78346 268 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 CAMK1Q14012 370 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 KPNB1Q14974 876 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ACAD10Q6JQN1 1059 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 AADACL2Q6P093 401 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 KIAA1324Q6UXG2 1013 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 RFX6Q8HWS3 928 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 LSM14AQ8ND56 463 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 RFWD2Q8NHY2 731 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ZFPM2Q8WW38 1151 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 KAT2BQ92831 832 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 CELF1Q92879 486 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ATP2A3Q93084 1043 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 RNF125Q96EQ8 232 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 RRP36Q96EU6 259 aaKnown RBP4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 C7orf26Q96N11 449 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 ASB2Q96Q27 587 aa4.07□□□□□ -1.76
SMCHD1-209ENST00000583441 FUZQ9BT04 418 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms