RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-215	ENST00000580879	SNRNP25	Q9BV90	132 aa	Known RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	GPR174	Q9BXC1	333 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	DHX35	Q9H5Z1	703 aa	Known RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	FBRS	Q9HAH7	460 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	ATP13A1	Q9HD20	1204 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	TMEM248	Q9NWD8	314 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	WSB2	Q9NYS7	404 aa	Predicted RBP	13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	AP4E1	Q9UPM8	1137 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	ACTL7A	Q9Y615	435 aa		13.59	□□□□□ -0.23
NUP85-215	ENST00000580879	TARSL2	A2RTX5	802 aa	Known RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	PATE3	B3GLJ2	98 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	MID1	O15344	667 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	SMAD6	O43541	496 aa	Known RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	ATP9B	O43861	1147 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	AKR1B10	O60218	316 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	PRPSAP2	O60256	369 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	LRP3	O75074	770 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	LRCH4	O75427	683 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	MAPKAPK2	P49137	400 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	ZNF75D	P51815	510 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	SEMA3B	Q13214	749 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	CST6	Q15828	149 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	CSRP2	Q16527	193 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	SLC18A3	Q16572	532 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	ASTE1	Q2TB18	679 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	PLA2G2C	Q5R387	149 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	IL31	Q6EBC2	164 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	LEKR1	Q6ZMV7	388 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	PRR23C	Q6ZRP0	262 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	SH2D3C	Q8N5H7	860 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	KCTD15	Q96SI1	283 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	FAM129B	Q96TA1	746 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	TMEM74B	Q9NUR3	256 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	SPTLC3	Q9NUV7	552 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	SERGEF	Q9UGK8	458 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	ANAPC7	Q9UJX3	599 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	PCDHGA5	Q9Y5G8	931 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	PLXND1	Q9Y4D7	1925 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	DOCK4	Q8N1I0	1966 aa		13.58	□□□□□ -0.24
NUP85-215	ENST00000580879	NUMA1	Q14980	2115 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	SSU72P8	A0A1W2PR75	194 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	GDF9	O60383	454 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	RAMP2	O60895	175 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	RNASEH1	O60930	286 aa	Known RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ZMPSTE24	O75844	475 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ZNF806	P0C7X5	589 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	IL1R2	P27930	398 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ACSL1	P33121	698 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	METAP1	P53582	386 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	AIF1	P55008	147 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	TPI1	P60174	286 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ZNF33A	Q06730	810 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	SMTNL2	Q2TAL5	461 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	POM121L1P	Q3SYA9	428 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	TTC31	Q49AM3	519 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ERMARD	Q5T6L9	678 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ZNF783	Q6ZMS7	281 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ZNF354C	Q86Y25	554 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	CPNE8	Q86YQ8	564 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	CNGA4	Q8IV77	575 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	GPR161	Q8N6U8	529 aa	Known RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	RTL3	Q8N8U3	475 aa	Known RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	C12orf50	Q8NA57	414 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	TNKS2	Q9H2K2	1166 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	PABPC3	Q9H361	631 aa	Known RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	NOL6	Q9H6R4	1146 aa	Known RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	ZWILCH	Q9H900	591 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	VPS45	Q9NRW7	570 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	RXFP3	Q9NSD7	469 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	CTTNBP2NL	Q9P2B4	639 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	HS3ST2	Q9Y278	367 aa		13.57	□□□□□ -0.24
NUP85-215	ENST00000580879	LAMA1	P25391	3075 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	RALGAPA1	Q6GYQ0	2036 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879		A0A1W2PP55	124 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	MEI4	A8MW99	385 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	EEF2K	O00418	725 aa	Known RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	PLK4	O00444	970 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	RNASEH2A	O75792	299 aa	Known RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	IL1B	P01584	269 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	IGLV3-19	P01714	112 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	MAOB	P27338	520 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	OXTR	P30559	389 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	SLC8A1	P32418	973 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	VASP	P50552	380 aa	Predicted RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	ARF5	P84085	180 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	ZBTB16	Q05516	673 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	ELAVL3	Q14576	367 aa	Known RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	POLD3	Q15054	466 aa	Predicted RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	AASDH	Q4L235	1098 aa	Predicted RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	KCNT1	Q5JUK3	1230 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	SPDYC	Q5MJ68	293 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	TXNRD3NB	Q6F5E7	133 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	C22orf39	Q6P5X5	142 aa		13.56	□□□□□ -0.24
NUP85-215	ENST00000580879	TC2N	Q8N9U0	490 aa		13.56	□□□□□ -0.24

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