RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KDELR1P24390 212 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 AVPR2P30518 371 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 CXCR5P32302 372 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 TIE1P35590 1138 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 MARCKSL1P49006 195 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 NUBP1P53384 320 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 POLD3Q15054 466 aaPredicted RBP15.88■□□□□ 0.13
SS18-216ENST00000580751 PARP15Q460N3 678 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 TFDP3Q5H9I0 405 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 DCAF12L1Q5VU92 463 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 EGFLAMQ63HQ2 1017 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 SDE2Q6IQ49 451 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 TMCO3Q6UWJ1 677 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 MAMSTRQ6ZN01 415 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 CHPFQ8IZ52 775 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 APCDD1Q8J025 514 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 LZTR1Q8N653 840 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 ALLCQ8N6M5 410 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 IL17RCQ8NAC3 791 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 FAF2Q96CS3 445 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 ALG14Q96F25 216 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 FRMD8P1Q9BZ68 369 aaPredicted RBP15.88■□□□□ 0.13
SS18-216ENST00000580751 ATP13A1Q9HD20 1204 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 NDFIP2Q9NV92 336 aa15.88■□□□□ 0.13
SS18-216ENST00000580751 THAP10Q9P2Z0 257 aaPredicted RBP15.88■□□□□ 0.13
SS18-216ENST00000580751 ZNF318Q5VUA4 2279 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 A0A0D9SEW6 157 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 GOLGA6L10A0A0M3HER8 536 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 CTAGE15A4D2H0 777 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 CCDC188H7C350 402 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 DCLK1O15075 740 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 TJP3O95049 919 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SLU7O95391 586 aaKnown RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 KLF8O95600 359 aaPredicted RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 SRPRAP08240 638 aaKnown RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 CTAGE8P0CG41 777 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 IL4RP24394 825 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 NTSR1P30989 418 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SERPINB6P35237 376 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 DNA2P51530 1060 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 CCR3P51677 355 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 NDST2P52849 883 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 ST8SIA6P61647 398 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 ECT2LQ008S8 904 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 MTAPQ13126 283 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 TFDP2Q14188 446 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 GAS6Q14393 721 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 ZNF234Q14588 700 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 FNDC3BQ53EP0 1204 aaKnown RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 EOGTQ5NDL2 527 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 EMC10Q5UCC4 262 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 IL31Q6EBC2 164 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SERPINA13PQ6UXR4 307 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SPOCD1Q6ZMY3 1216 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SYT13Q7L8C5 426 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 CTAGE6Q86UF2 777 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 CTAGE4Q8IX94 777 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 KDM1BQ8NB78 822 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 TXNDC5Q8NBS9 432 aaKnown RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 CYB5D2Q8WUJ1 264 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SORCS1Q8WY21 1168 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 RAPGEF5Q92565 580 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 PSMB7Q99436 277 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 LRFN3Q9BTN0 628 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SPON2Q9BUD6 331 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 OSBPL8Q9BZF1 889 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 SPATA6Q9NWH7 488 aaPredicted RBP15.87■□□□□ 0.13
SS18-216ENST00000580751 SLC25A13Q9UJS0 675 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 HCN2Q9UL51 889 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 MMP17Q9ULZ9 603 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 HPCAL4Q9UM19 191 aa15.87■□□□□ 0.13
SS18-216ENST00000580751 KMT2EQ8IZD2 1858 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 MUC22E2RYF6 1773 aaPredicted RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 CXorf51AA0A1B0GTR3 108 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 C3orf70A6NLC5 250 aaPredicted RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 ZNF185O15231 689 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 FGGP02679 453 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 AMPD1P23109 780 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 NNMTP40261 264 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 CDKN2BP42772 138 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 MMRN1Q13201 1228 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 PTPRNQ16849 979 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 LONRF2Q1L5Z9 754 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 ANKRD20A8PQ5CZ79 823 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 RETSATQ6NUM9 610 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 PKN3Q6P5Z2 889 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 CCDC50Q8IVM0 306 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 CCDC33Q8N5R6 958 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 DTWD2Q8NBA8 298 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 TTC13Q8NBP0 860 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 OR7D4Q8NG98 312 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 ARHGEF2Q92974 986 aaKnown RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 RUNDC3BQ96NL0 473 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 GABRG3Q99928 467 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 ACE2Q9BYF1 805 aaPredicted RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 NOL6Q9H6R4 1146 aaKnown RBP15.86■□□□□ 0.13
SS18-216ENST00000580751 LRRC19Q9H756 370 aa15.86■□□□□ 0.13
SS18-216ENST00000580751 CACNA2D2Q9NY47 1150 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms