RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 VPS36Q86VN1 386 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 CACUL1Q86Y37 369 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 RGL4Q8IZJ4 473 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 CPLX3Q8WVH0 158 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 ZYG11BQ9C0D3 744 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 XPO4Q9C0E2 1151 aaKnown RBP25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 SLC25A13Q9UJS0 675 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 CAPN11Q9UMQ6 739 aa25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.52■■□□□ 1.68
CDC42EP4-205ENST00000580315 FREM2Q5SZK8 3169 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 EDDM13A0A1B0GTR0 161 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 TARSL2A2RTX5 802 aaKnown RBP25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 RNASEH1O60930 286 aaKnown RBP25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 TPMTP51580 245 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 HDAC4P56524 1084 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 SLC14A1Q13336 389 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 HNRNPDQ14103 355 aaKnown RBP25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 ALFQ53S48 1182 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 PPP1R15BQ5SWA1 713 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 SYCP2LQ5T4T6 812 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 CHCHD4Q8N4Q1 142 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 FOXJ1Q92949 421 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 RPL10LQ96L21 214 aaKnown RBP25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 CNPY3Q9BT09 278 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 MPP6Q9NZW5 540 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 OR12D3Q9UGF7 316 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 SUSD2Q9UGT4 822 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 ITIH6Q6UXX5 1313 aa25.51■■□□□ 1.67
CDC42EP4-205ENST00000580315 FAM221BA6H8Z2 402 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 DDX3XO00571 662 aaKnown RBP eCLIP25.5■■□□□ 1.672e-9■■■■□ 23.1
CDC42EP4-205ENST00000580315 RTN2O75298 545 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 GJB3O75712 270 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 FTLP02792 175 aaPredicted RBP25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 DNTTP04053 509 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 RPL7AP62424 266 aaKnown RBP25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 KRT83P78385 493 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 NRG1Q02297 640 aaPredicted RBP25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 RAB6CQ53S08 254 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 ZNF776Q68DI1 518 aaPredicted RBP25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 TFAP2DQ7Z6R9 452 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 NTAN1Q96AB6 310 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 TRIM11Q96F44 468 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 TOE1Q96GM8 510 aaKnown RBP25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 CAMK1GQ96NX5 476 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 RAB6CQ9H0N0 254 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 OSBPL2Q9H1P3 480 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 PPARGC1AQ9UBK2 798 aaKnown RBP25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 SLCO3A1Q9UIG8 710 aa25.5■■□□□ 1.67
CDC42EP4-205ENST00000580315 MUC22E2RYF6 1773 aaPredicted RBP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 TTC34A8MYJ7 566 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 CCP110O43303 1012 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 SH3BP5O60239 455 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 SIN3BO75182 1162 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 IGLV3-19P01714 112 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 SERPING1P05155 500 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 GNSP15586 552 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 MAOBP27338 520 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 OR1E1P30953 314 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 NUMBP49757 651 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 RPS14P62263 151 aaKnown RBP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 SFSWAPQ12872 951 aaKnown RBP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 MAMLD1Q13495 774 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 ZNF423Q2M1K9 1284 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 TTC31Q49AM3 519 aaPredicted RBP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 WDR45BQ5MNZ6 344 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 OR52K2Q8NGK3 314 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 ALG14Q96F25 216 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 C2orf49Q9BVC5 232 aaPredicted RBP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 MTG2Q9H4K7 406 aa25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 WSB2Q9NYS7 404 aaPredicted RBP25.49■■□□□ 1.67
CDC42EP4-205ENST00000580315 MYBL1P10243 752 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 C7P10643 843 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 STK19P49842 368 aaPredicted RBP25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 VASPP50552 380 aaPredicted RBP25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 HGSNATQ68CP4 663 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 PLEKHA7Q6IQ23 1121 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 SCYL2Q6P3W7 929 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 RAB44Q7Z6P3 723 aaPredicted RBP25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 SLFN11Q7Z7L1 901 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 CCDC185Q8N715 623 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 RNF214Q8ND24 703 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 RSPH9Q9H1X1 276 aaPredicted RBP25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 RETREG1Q9H6L5 497 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 SCML1Q9UN30 329 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 OR51B4Q9Y5P0 310 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 SCINQ9Y6U3 715 aa25.48■■□□□ 1.67
CDC42EP4-205ENST00000580315 GYPCP04921 128 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 AIF1P55008 147 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 SCAPQ12770 1279 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 TRIP6Q15654 476 aaKnown RBP25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 EFHC2Q5JST6 749 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 C9orf64Q5T6V5 341 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 RWDD4Q6NW29 188 aaKnown RBP25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 ZNF783Q6ZMS7 281 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 TMC6Q7Z403 805 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 DNASE2BQ8WZ79 361 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 ZNF653Q96CK0 615 aa25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 CNOT8Q9UFF9 292 aaKnown RBP25.47■■□□□ 1.67
CDC42EP4-205ENST00000580315 ANKRD11Q6UB99 2663 aaPredicted RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms