RNA–Protein interactions for RNA: ENST00000580218.5

DHX40-208, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-208ENST00000580218 FAM129BQ96TA1 746 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 DUSP15Q9H1R2 295 aaPredicted RBP13.75□□□□□ -0.21
DHX40-208ENST00000580218 RSPH9Q9H1X1 276 aaPredicted RBP13.75□□□□□ -0.21
DHX40-208ENST00000580218 DHX35Q9H5Z1 703 aaKnown RBP13.75□□□□□ -0.21
DHX40-208ENST00000580218 RETREG1Q9H6L5 497 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 LRRC19Q9H756 370 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 ETNK2Q9NVF9 386 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 CWC15Q9P013 229 aaKnown RBP13.75□□□□□ -0.21
DHX40-208ENST00000580218 CTTNBP2NLQ9P2B4 639 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 DNAI1Q9UI46 699 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 INTUQ9ULD6 942 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 INVSQ9Y283 1065 aa13.75□□□□□ -0.21
DHX40-208ENST00000580218 PLXNA2O75051 1894 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 EIF3CLB5ME19 914 aaKnown RBP13.74□□□□□ -0.21
DHX40-208ENST00000580218 CREB3O43889 395 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 RNF8O76064 485 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 NDUFA10O95299 355 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 HTR7P34969 479 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 MRE11P49959 708 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 METAP1P53582 386 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 RPS14P62263 151 aaKnown RBP13.74□□□□□ -0.21
DHX40-208ENST00000580218 PLK5Q496M5 336 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 ATP13A4Q4VNC1 1196 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 RFX8Q6ZV50 586 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 POLNQ7Z5Q5 900 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 CACUL1Q86Y37 369 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 CCDC170Q8IYT3 715 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 SPC24Q8NBT2 197 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 NETO2Q8NC67 525 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 OR2T3Q8NH03 318 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 FAM131CQ96AQ9 280 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 FAM122AQ96E09 287 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 EIF3CQ99613 913 aaKnown RBP13.74□□□□□ -0.21
DHX40-208ENST00000580218 EPAS1Q99814 870 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 MUC3BQ9H195 1237 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 PDFQ9HBH1 243 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 PCDH18Q9HCL0 1135 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
DHX40-208ENST00000580218 IMPACTQ9P2X3 320 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 SERGEFQ9UGK8 458 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 PLA2G4CQ9UP65 541 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 ANKRD36A6QL64 1941 aa13.74□□□□□ -0.21
DHX40-208ENST00000580218 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 TP53BP1Q12888 1972 aaPredicted RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 SHROOM3Q8TF72 1996 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 MYO1FO00160 1098 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 FGF10O15520 208 aaPredicted RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 LMNAP02545 664 aaKnown RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 CTSLP07711 333 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 HCAR3P49019 387 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 SERPINH1P50454 418 aaKnown RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 TPI1P60174 286 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 SULT2A1Q06520 285 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 STARD3Q14849 445 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 LPAL2Q16609 132 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 TSR1Q2NL82 804 aaKnown RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 PMS2CLQ68D20 193 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 SDE2Q6IQ49 451 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 Q6ZVU0 165 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 TMPRSS6Q8IU80 811 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 ACRBPQ8NEB7 543 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 HMCESQ96FZ2 354 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 ZNF419Q96HQ0 510 aaPredicted RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 CSPG4P5Q96PW8 444 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 LACRTQ9GZZ8 138 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 GOLPH3Q9H4A6 298 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 ZWILCHQ9H900 591 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 PRDM16Q9HAZ2 1276 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 PCDHA13Q9Y5I0 950 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 EPN1Q9Y6I3 576 aaPredicted RBP13.73□□□□□ -0.21
DHX40-208ENST00000580218 CACNA1EQ15878 2313 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 SPTBN4Q9H254 2564 aa13.73□□□□□ -0.21
DHX40-208ENST00000580218 DOCK9Q9BZ29 2069 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 EDDM13A0A1B0GTR0 161 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 CXorf51AA0A1B0GTR3 108 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 C3orf70A6NLC5 250 aaPredicted RBP13.72□□□□□ -0.21
DHX40-208ENST00000580218 EEF2KO00418 725 aaKnown RBP13.72□□□□□ -0.21
DHX40-208ENST00000580218 GFRA3O60609 400 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 RAMP2O60895 175 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 ALDH1A2O94788 518 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 MOCS3O95396 460 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 ERCC2P18074 760 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 TPMTP51580 245 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 SIM2Q14190 667 aaPredicted RBP13.72□□□□□ -0.21
DHX40-208ENST00000580218 DPYSL3Q14195 570 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
DHX40-208ENST00000580218 C22orf39Q6P5X5 142 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 TMTC1Q8IUR5 882 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 CCDC117Q8IWD4 279 aaPredicted RBP13.72□□□□□ -0.21
DHX40-208ENST00000580218 RHOT2Q8IXI1 618 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 STK40Q8N2I9 435 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 AADATQ8N5Z0 425 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 OR2A12Q8NGT7 310 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 HSPH1Q92598 858 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 FAF2Q96CS3 445 aa13.72□□□□□ -0.21
DHX40-208ENST00000580218 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms