RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 DQX1Q8TE96 717 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FRS2Q8WU20 508 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 BTN2A3PQ96KV6 586 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC46A1Q96NT5 459 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FAM117AQ9C073 453 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 UCKL1Q9NWZ5 548 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC12A6Q9UHW9 1150 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC25A13Q9UJS0 675 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PPM1HQ9ULR3 514 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PCDHGA8Q9Y5G5 932 aa12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 UTP20O75691 2785 aaKnown RBP12.57□□□□□ -0.4
CDK5RAP3-216ENST00000579853 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RP1P56715 2156 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SPTBN1Q01082 2364 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TCAF2A6NFQ2 919 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 F5H5T6 163 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CETN3O15182 167 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC31A1O15431 190 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ATP9BO43861 1147 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MOCS2O96007 188 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TACR2P21452 398 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 HNRNPA2B1P22626 353 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 GSE1Q14687 1217 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RABGAP1LQ5R372 815 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CHSY1Q86X52 802 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 WDR48Q8TAF3 677 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RNF34Q969K3 372 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FAM149B1Q96BN6 582 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MYEOVQ96EZ4 313 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CCDC114Q96M63 670 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CALN1Q9BXU9 219 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 IL17BQ9UHF5 180 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SARDHQ9UL12 918 aa12.56□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 H3BM21 787 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 M0QYV0 167 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TCEA3O75764 348 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 GIMD1P0DJR0 217 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 VAV1P15498 845 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PDGFRAP16234 1089 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 DLG2Q15700 870 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 POM121L1PQ3SYA9 428 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ACCSLQ4AC99 568 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZCWPW2Q504Y3 356 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 C3orf38Q5JPI3 329 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TCERG1LQ5VWI1 586 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZCCHC8Q6NZY4 707 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TMEM270Q6UE05 265 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PRICKLE2Q7Z3G6 844 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 HORMAD1Q86X24 394 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CCAR2Q8N163 923 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ATP6V0D2Q8N8Y2 350 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 IFI44Q8TCB0 444 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 OSBPL2Q9H1P3 480 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 DYRK4Q9NR20 520 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SATB2Q9UPW6 733 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MAPK8IP1Q9UQF2 711 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CSNK1G3Q9Y6M4 447 aa12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-216ENST00000579853 A0A1W2PQU0 124 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 A6NNZ2 444 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 K7ELQ4 463 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 K7ESM1 405 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC2A3P11169 496 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CMA1P23946 247 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ACADSBP45954 432 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 METAP1P53582 386 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 INHBCP55103 352 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MTA1Q13330 715 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 KIF26BQ2KJY2 2108 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ARL13BQ3SXY8 428 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 KIAA1614Q5VZ46 1190 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RAP1GAP2Q684P5 730 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RBM44Q6ZP01 1051 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ABI3BPQ7Z7G0 1075 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 UBR7Q8N806 425 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 OR13H1Q8NG92 308 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 WDR36Q8NI36 951 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CLEC4CQ8WTT0 213 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CCNL2Q96S94 520 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 MIS12Q9H081 205 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 DNAJC28Q9NX36 388 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 RCOR1Q9UKL0 485 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CA5BQ9Y2D0 317 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 HS3ST3A1Q9Y663 406 aa12.54□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 LY6G6EA0A0G2JKS1 128 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 CDRT15L2A8MXV6 281 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PIK3R2O00459 728 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SLC16A3O15427 465 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 FYNP06241 537 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 ZSCAN22P10073 491 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 SFTPCP11686 197 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PFKFB1P16118 471 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 PRLRP16471 622 aa12.53□□□□□ -0.4
CDK5RAP3-216ENST00000579853 TGM2P21980 687 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms