RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 T-ENOLP0DO92 83 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 FGF3P11487 239 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 ATP2A2P16615 1042 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 CCNCP24863 283 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ARNTP27540 789 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 HOXD10P28358 340 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 GABRB3P28472 473 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ALDH3A1P30838 453 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 SLC6A4P31645 630 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 HNRNPH1P31943 449 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 CYP2C18P33260 490 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ADRA1AP35348 466 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ACVRL1P37023 503 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 MAGEA11P43364 429 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 MAGEA12P43365 314 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 CSRP3P50461 194 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TUBP50607 506 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 PAPOLAP51003 745 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 SGSHP51688 502 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 APLP1P51693 650 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 KCNQ1P51787 676 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ATN1P54259 1190 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 TBX4P57082 545 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 RPL10AP62906 217 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 ELF3P78545 371 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 NRG1Q02297 640 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 BST1Q10588 318 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TAF10Q12962 218 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 BNIP1Q12981 228 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 PDE1CQ14123 709 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 PPP2R5DQ14738 602 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 PCLAFQ15004 111 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TRIP4Q15650 581 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 MAPRE1Q15691 268 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 DLG2Q15700 870 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ARL13BQ3SXY8 428 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TTC31Q49AM3 519 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 ANKRD20A4Q4UJ75 823 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 SPANXN3Q5MJ09 141 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 BRMS1LQ5PSV4 323 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TEDDM1Q5T9Z0 273 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ZNF280DQ6N043 979 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 CASC4Q6P4E1 433 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 FUT10Q6P4F1 479 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TIFABQ6ZNK6 161 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 BZW1Q7L1Q6 419 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 TFAP2DQ7Z6R9 452 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 DEFB128Q7Z7B8 93 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 NPAS4Q8IUM7 802 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 RNF168Q8IYW5 571 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 DCP1BQ8IZD4 617 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 KIF2BQ8N4N8 673 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 DCLK2Q8N568 766 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 RTL3Q8N8U3 475 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 ANKS4BQ8N8V4 417 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 OR52K2Q8NGK3 314 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 LRRC8CQ8TDW0 803 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 DIS3LQ8TF46 1054 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 UTP4Q969X6 686 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 MOCOSQ96EN8 888 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 MFSD3Q96ES6 412 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 CERS2Q96G23 380 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ATXN7L3BQ96GX2 97 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 MRGPRX2Q96LB1 330 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 DEFB118Q96PH6 123 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 FAM193BQ96PV7 902 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 HAPLN3Q96S86 360 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 RBBP8Q99708 897 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 SEPT5Q99719 369 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 TBL1YQ9BQ87 522 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TMEM120AQ9BXJ8 343 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 OXCT2Q9BYC2 517 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 PITPNM3Q9BZ71 974 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 SLC13A1Q9BZW2 595 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 ELAC1Q9H777 363 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 MANSC1Q9H8J5 431 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 CAB39LQ9H9S4 337 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 PAK6Q9NQU5 681 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 ACSS2Q9NR19 701 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 CHRAC1Q9NRG0 131 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 IARS2Q9NSE4 1012 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.72□□□□□ -1.65
NUP85-213ENST00000579838 PLA2G2EQ9NZK7 142 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 TMEM216Q9P0N5 145 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 SIRPGQ9P1W8 387 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 KLHL14Q9P2G3 628 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 SOX13Q9UN79 622 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 MTO1Q9Y2Z2 717 aaKnown RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 PLLPQ9Y342 182 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 MTF2Q9Y483 593 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 TRIM17Q9Y577 477 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 PCDHB7Q9Y5E2 793 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.72□□□□□ -1.65
NUP85-213ENST00000579838 RPS6KL1Q9Y6S9 549 aa4.72□□□□□ -1.65
NUP85-213ENST00000579838 HTTP42858 3142 aa4.71□□□□□ -1.66
NUP85-213ENST00000579838 IGLV3-10A0A075B6K4 115 aa4.71□□□□□ -1.66
NUP85-213ENST00000579838 FAM237BA0A1B0GVD1 139 aa4.71□□□□□ -1.66
NUP85-213ENST00000579838 SLC12A8A0AV02 714 aa4.71□□□□□ -1.66
NUP85-213ENST00000579838 OR6C75A6NL08 312 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms