RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NHEJ1Q9H9Q4 299 aaPredicted RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 KIF9Q9HAQ2 790 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 POPDC2Q9HBU9 364 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 LRRC4Q9HBW1 653 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 TRPV5Q9NQA5 729 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC2A4RGQ9NR83 387 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 METTL5Q9NRN9 209 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ABCC13Q9NSE7 274 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PIGVQ9NUD9 493 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SPTLC3Q9NUV7 552 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 TDP1Q9NUW8 608 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 C19orf73Q9NVV2 129 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGEF38Q9NXL2 777 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 EHD2Q9NZN4 543 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ADAM22Q9P0K1 906 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 IGSF9Q9P2J2 1179 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 SFMBT1Q9UHJ3 866 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 XPO7Q9UIA9 1087 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 ZMYM5Q9UJ78 669 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 DUSP12Q9UNI6 340 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 HBS1LQ9Y450 684 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 CPQQ9Y646 472 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 BZW2Q9Y6E2 419 aaKnown RBP3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 THADAQ6YHU6 1953 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 PI4KAP42356 2102 aa3.94□□□□□ -1.78
SMARCE1-215ENST00000578995 MUC6Q6W4X9 2439 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 USP34Q70CQ2 3546 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ZFC3H1O60293 1989 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 IGLV3-10A0A075B6K4 115 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 E2F8A0AVK6 867 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ANKRD62A6NC57 917 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 GOLGA6L3A6NEY3 463 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TMCO5BA8MYB1 307 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 GOLGA8SH3BPF8 625 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SCAMP3O14828 347 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CHADO15335 359 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 PJA2O43164 708 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 HOXC11O43248 304 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 LRCH4O75427 683 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 GRAP2O75791 330 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 NDUFA10O95299 355 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 LATS1O95835 1130 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TRUB2O95900 331 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 PENKP01210 267 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CYP17A1P05093 508 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CALB1P05937 261 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CKMP06732 381 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TPM3P06753 285 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 MBL2P11226 248 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ARSAP15289 507 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 PSMC3P17980 439 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TNFAIP3P21580 790 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 HOXC13P31276 330 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 GBP2P32456 591 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ATP5C1P36542 298 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 OPRD1P41143 372 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGAP25P42331 645 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 NSFP46459 744 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 MRE11P49959 708 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ARSEP51690 589 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 MLLT6P55198 1093 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 GPC5P78333 572 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC25A11Q02978 314 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TNK2Q07912 1038 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SCAPQ12770 1279 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TDGQ13569 410 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 PPP2R5DQ14738 602 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 C15orf59Q2T9L4 293 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SLC25A52Q3SY17 297 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGAP15Q53QZ3 475 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TDRD12Q587J7 1177 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 EFHC1Q5JVL4 640 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 C10orf120Q5SQS8 335 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 FAM102AQ5T9C2 384 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 PIK3R6Q5UE93 754 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 DAB2IPQ5VWQ8 1189 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CWF19L1Q69YN2 538 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TRIM68Q6AZZ1 485 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TXNRD3NBQ6F5E7 133 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 OR6B2Q6IFH4 312 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ALKBH5Q6P6C2 394 aaKnown RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 RHBDF2Q6PJF5 856 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 TOGARAM2Q6ZUX3 1019 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 MTSS1LQ765P7 747 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 STRADAQ7RTN6 431 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ZNF438Q7Z4V0 828 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 KIAA0907Q7Z7F0 614 aaPredicted RBP3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 PHLDB2Q86SQ0 1253 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 C12orf40Q86WS4 652 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ANKMY2Q8IV38 441 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SFTPA1Q8IWL2 248 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 LRRC8AQ8IWT6 810 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ADGRG2Q8IZP9 1017 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 GJD3Q8N144 294 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ARHGAP18Q8N392 663 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 CPXM2Q8N436 756 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 NIPA2Q8N8Q9 360 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 SPC24Q8NBT2 197 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 ACRBPQ8NEB7 543 aa3.93□□□□□ -1.78
SMARCE1-215ENST00000578995 OR52K2Q8NGK3 314 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms