RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 OTOP3Q7RTS5 596 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 MFN1Q8IWA4 741 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 MFSD6LQ8IWD5 586 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 TP53INP2Q8IXH6 220 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 CARNMT1Q8N4J0 409 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 DEPDC1BQ8WUY9 529 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 MAML1Q92585 1016 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 ELSPBP1Q96BH3 223 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 PPP1R2P1Q96PQ5 205 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 MYADMQ96S97 322 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 IL12RB2Q99665 862 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 ACE2Q9BYF1 805 aaPredicted RBP13.72□□□□□ -0.21
SRSF1-202ENST00000578430 TSPYL1Q9H0U9 437 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 EPC1Q9H2F5 836 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 POMKQ9H5K3 350 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 C10orf88Q9H8K7 445 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 SP110Q9HB58 689 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
SRSF1-202ENST00000578430 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 EPS15L1Q9UBC2 864 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 RAPGEFL1Q9UHV5 662 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 HPCAL4Q9UM19 191 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 DENND4AQ7Z401 1863 aa13.72□□□□□ -0.21
SRSF1-202ENST00000578430 NUP205Q92621 2012 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 CHD5Q8TDI0 1954 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 DNALI1O14645 258 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 SCAMP3O14828 347 aaKnown RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 HOXC11O43248 304 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 KDELR3O43731 214 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 PRAMEF11O60813 436 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ECI2O75521 394 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ADH1CP00326 375 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ZSCAN5DPP0CG00 497 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 CCNB1P14635 433 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 PTPN3P26045 913 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 FDFT1P37268 417 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 VIPR2P41587 438 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 PLK1P53350 603 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 VSNL1P62760 191 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TNK2Q07912 1038 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 FCHO2Q0JRZ9 810 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 WASHC5Q12768 1159 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 SMAD4Q13485 552 aaKnown RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 RFTN1Q14699 578 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TRIP13Q15645 432 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TEX44Q53QW1 395 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ANKRD20A2Q5SQ80 823 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ANKRD20A1Q5TYW2 823 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ANKRD20A3Q5VUR7 823 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 RNF219Q5W0B1 726 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ITPRIPL1Q6GPH6 555 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ARHGEF18Q6ZSZ5 1173 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TPGS1Q6ZTW0 290 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 HOOK3Q86VS8 718 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ZNF354CQ86Y25 554 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TMEM25Q86YD3 366 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 GLIS1Q8NBF1 620 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 IFT81Q8WYA0 676 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ATP2A3Q93084 1043 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 ASB2Q96Q27 587 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 BBS2Q9BXC9 721 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 FOXP3Q9BZS1 431 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 MUC3BQ9H195 1237 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 DPH5Q9H2P9 285 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 LINC00597Q9H2U6 94 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 GRHL1Q9NZI5 618 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 IGSF9Q9P2J2 1179 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 CDH22Q9UJ99 828 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 USP15Q9Y4E8 981 aaPredicted RBP13.71□□□□□ -0.21
SRSF1-202ENST00000578430 WNT6Q9Y6F9 365 aa13.71□□□□□ -0.21
SRSF1-202ENST00000578430 XIRP2A4UGR9 3374 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 KCNK1O00180 336 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ETS1P14921 441 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ACVRL1P37023 503 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 MAGEA6P43360 314 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 GEMIN4P57678 1058 aaKnown RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 GAD2Q05329 585 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 NR1H3Q13133 447 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 HLTFQ14527 1009 aaKnown RBP eCLIP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 DMC1Q14565 340 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 MORF4L2Q15014 288 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 DHCR24Q15392 516 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 PARP6Q2NL67 630 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 EML3Q32P44 896 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 LY6G5CQ5SRR4 150 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 IZUMO3Q5VZ72 239 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 IL31Q6EBC2 164 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 TANGO2Q6ICL3 276 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 CEP128Q6ZU80 1094 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 B4GALNT4Q76KP1 1039 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms