RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 TFEBP19484 476 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 POU1F1P28069 291 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 WEE1P30291 646 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 RALGDSQ12967 914 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 RIPK1Q13546 671 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 MSS51Q4VC12 460 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 FBXO39Q8N4B4 442 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 ANKRD52Q8NB46 1076 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 TRPC4APQ8TEL6 797 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 ERLEC1Q96DZ1 483 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 CCDC126Q96EE4 140 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 PPP1R10Q96QC0 940 aaKnown RBP12.23□□□□□ -0.45
ERBB2-206ENST00000578373 SLC4A5Q9BY07 1137 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 MYH15Q9Y2K3 1946 aa12.23□□□□□ -0.45
ERBB2-206ENST00000578373 KLRG2A4D1S0 409 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 F5H5T6 163 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 BTN3A1O00481 513 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 NCAM2O15394 837 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 MAN1A2O60476 641 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 RAMP2O60895 175 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SP100P23497 879 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CD86P42081 329 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SKIV2L2P42285 1042 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 TMED10P49755 219 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CDH18Q13634 790 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 TRIM16LQ309B1 348 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 PGS1Q32NB8 556 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 OTOP3Q7RTS5 596 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 FBXW8Q8N3Y1 598 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 METTL6Q8TCB7 284 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 MAGEE2Q8TD90 523 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 DDI1Q8WTU0 396 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 KCTD14Q9BQ13 255 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 TBL1YQ9BQ87 522 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 DHX33Q9H6R0 707 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SFMBT1Q9UHJ3 866 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SNCAIPQ9Y6H5 919 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 MFSD11O43934 449 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SERPINA6P08185 405 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 HSPA13P48723 471 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 MRPS15P82914 257 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 OGDHQ02218 1023 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SEMA5AQ13591 1074 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 NET1Q7Z628 596 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 C11orf96Q7Z7L8 435 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 FAM126BQ8IXS8 530 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 SLC4A11Q8NBS3 891 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 ZNF398Q8TD17 642 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 AP4S1Q9Y587 144 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 MAGEB16A2A368 324 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 C5orf60A6NFR6 353 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CCNT2O60583 730 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CPSF4O95639 269 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CSH1P0DML2 217 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CSH2P0DML3 217 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 NPY2RP49146 381 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 PSME3P61289 254 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 FKBP1AP62942 108 aaKnown RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 VAC14Q08AM6 782 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 TLK2Q86UE8 772 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CARNMT1Q8N4J0 409 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 C12orf50Q8NA57 414 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 TWNKQ96RR1 684 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 ZNF670Q9BS34 389 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 DGCR6LQ9BY27 220 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 ABCG8Q9H221 673 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 DPEP3Q9H4B8 488 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 TMEM216Q9P0N5 145 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 CORO1CQ9ULV4 474 aaPredicted RBP12.22□□□□□ -0.45
ERBB2-206ENST00000578373 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
ERBB2-206ENST00000578373 DHX15O43143 795 aaKnown RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TNFAIP8O95379 198 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 SERPINF2P08697 491 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 CCNB1P14635 433 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 DNAJB2P25686 324 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 FOLH1Q04609 750 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 SLC39A12Q504Y0 691 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 DDHD1Q8NEL9 900 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 FAR2Q96K12 515 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 NSMCE2Q96MF7 247 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TRAPPC9Q96Q05 1148 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 NDUFA13Q9P0J0 144 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 VPS28Q9UK41 221 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 COQ4Q9Y3A0 265 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 FAM32AQ9Y421 112 aaKnown RBP12.21□□□□□ -0.45
ERBB2-206ENST00000578373 METTL18O95568 372 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 PIK3R1P27986 724 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 NDUFV1P49821 464 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 CDK7P50613 346 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 RENBPP51606 427 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 TBX4P57082 545 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 RTP1P59025 263 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 SLC39A4Q6P5W5 647 aa12.21□□□□□ -0.45
ERBB2-206ENST00000578373 RIOX2Q8IUF8 465 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms