RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ARRDC1-AS1Q9H2J1 176 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 DHX35Q9H5Z1 703 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 CD93Q9NPY3 652 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 NDFIP2Q9NV92 336 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 USP36Q9P275 1121 aaKnown RBP22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 UVRAGQ9P2Y5 699 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 DNAI1Q9UI46 699 aa22.73■■□□□ 1.23
SMARCD2-206ENST00000577990 MED19A0JLT2 244 aaPredicted RBP22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 ATP9BO43861 1147 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 LRP3O75074 770 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 EPN2O95208 641 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 TMEM253P0C7T8 217 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 C7P10643 843 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 ACADMP11310 421 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 CA9Q16790 459 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 C9orf64Q5T6V5 341 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 DAB2IPQ5VWQ8 1189 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 PRR23CQ6ZRP0 262 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 CYP4V2Q6ZWL3 525 aaPredicted RBP22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 PSTKQ8IV42 348 aaKnown RBP22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 RTL3Q8N8U3 475 aaKnown RBP22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 SPON2Q9BUD6 331 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 CATSPERBQ9H7T0 1116 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 ATP13A1Q9HD20 1204 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 CTTNBP2NLQ9P2B4 639 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 HS3ST2Q9Y278 367 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 NYNRINQ9P2P1 1898 aaKnown RBP22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 CHD5Q8TDI0 1954 aa22.72■■□□□ 1.23
SMARCD2-206ENST00000577990 CNOT1A5YKK6 2376 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 PRR5-ARHGAP8B1AHC4 643 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 MYO1FO00160 1098 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 ETFBP38117 255 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 TPI1P60174 286 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 RPS14P62263 151 aaKnown RBP22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 ARHGAP8P85298 464 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 CSRP2Q16527 193 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 ZNF776Q68DI1 518 aaPredicted RBP22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 LPCAT2Q7L5N7 544 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 SH2D3CQ8N5H7 860 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 FRS2Q8WU20 508 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 PTPRN2Q92932 1015 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 KCTD15Q96SI1 283 aaPredicted RBP22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 RSPH9Q9H1X1 276 aaPredicted RBP22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 ITM2CQ9NQX7 267 aa22.71■■□□□ 1.23
SMARCD2-206ENST00000577990 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 WASH4PA8MWX3 477 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 CBX4O00257 560 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 EEF2KO00418 725 aaKnown RBP22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 FGF10O15520 208 aaPredicted RBP22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 GDF9O60383 454 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 RAMP2O60895 175 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 RNASEH1O60930 286 aaKnown RBP22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 GLDCP23378 1020 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 ACVRL1P37023 503 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 TPMTP51580 245 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 RPL6Q02878 288 aaKnown RBP22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 ZBTB16Q05516 673 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 SF3A2Q15428 464 aaKnown RBP22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 DLG2Q15700 870 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 ACCSLQ4AC99 568 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 IL31Q6EBC2 164 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 MAGEH1Q9H213 219 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 SMOC1Q9H4F8 434 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 PCDHGA5Q9Y5G8 931 aa22.7■■□□□ 1.22
SMARCD2-206ENST00000577990 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 ZMPSTE24O75844 475 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 MT-CO1P00395 513 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 IGLV3-19P01714 112 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 DNTTP04053 509 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 SRCP12931 536 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 VAV1P15498 845 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 TCF4P15884 667 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 IL1R2P27930 398 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 CD6P30203 668 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 OXTRP30559 389 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 BOLA3Q53S33 107 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 SPDYCQ5MJ68 293 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 RETSATQ6NUM9 610 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 LINGO4Q6UY18 593 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 TMEFF1Q8IYR6 380 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 STK40Q8N2I9 435 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 ATP11CQ8NB49 1132 aa22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 ARHGEF2Q92974 986 aaKnown RBP22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 ACE2Q9BYF1 805 aaPredicted RBP22.69■■□□□ 1.22
SMARCD2-206ENST00000577990 GON4LQ3T8J9 2241 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 DCDC2BA2VCK2 349 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 NDUFS2O75306 463 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 DHPSP49366 369 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 CLCN6P51797 869 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 ZNF135P52742 658 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 ELAVL3Q14576 367 aaKnown RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 POLD3Q15054 466 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 SMTNL2Q2TAL5 461 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 TTC31Q49AM3 519 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 PPP6R3Q5H9R7 873 aaPredicted RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 KCNT1Q5JUK3 1230 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 Q6ZVU0 165 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 TOE1Q96GM8 510 aaKnown RBP22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 PANX2Q96RD6 677 aa22.68■■□□□ 1.22
SMARCD2-206ENST00000577990 FAM129BQ96TA1 746 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms