RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 LGMNQ99538 433 aa13.58□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TRIM51Q9BSJ1 452 aa13.58□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TSPYL1Q9H0U9 437 aa13.58□□□□□ -0.24
CDK5RAP3-205ENST00000577802 WHRNQ9P202 907 aa13.58□□□□□ -0.24
CDK5RAP3-205ENST00000577802 KLHL8Q9P2G9 620 aaPredicted RBP13.58□□□□□ -0.24
CDK5RAP3-205ENST00000577802 LAMA3Q16787 3333 aa13.58□□□□□ -0.24
CDK5RAP3-205ENST00000577802 NYNRINQ9P2P1 1898 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 H3BQ06 376 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CHADO15335 359 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MBTPS2O43462 519 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CACNG3O60359 315 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MAFKO60675 156 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PRAMEF11O60813 436 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CYP17A1P05093 508 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ITIH2P19823 946 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 HSPA9P38646 679 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SULT2A1Q06520 285 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 HNRNPDQ14103 355 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PRPSAP1Q14558 356 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ZNF235Q14590 738 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 DHCR24Q15392 516 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 LY6G5CQ5SRR4 150 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 RNF219Q5W0B1 726 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 DUPD1Q68J44 220 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 VITQ6UXI7 678 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PPP1R21Q6ZMI0 780 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 RIN3Q8TB24 985 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SEC14L1Q92503 715 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MYEOVQ96EZ4 313 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 GUCD1Q96NT3 240 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PHF7Q9BWX1 381 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 FRMD8Q9BZ67 464 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ANKZF1Q9H8Y5 726 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 NDFIP2Q9NV92 336 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 UBA2Q9UBT2 640 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MTRF1LQ9UGC7 380 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CDH22Q9UJ99 828 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SHOC2Q9UQ13 582 aa13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 V9GYY5 206 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP3-205ENST00000577802 E7EVH7 732 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 KDELR3O43731 214 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CCNB1P14635 433 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 VAV1P15498 845 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 GDF10P55107 478 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SLC7A5Q01650 507 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 GPS1Q13098 491 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 HLTFQ14527 1009 aaKnown RBP eCLIP13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CCDC85BQ15834 202 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 LEXMQ3ZCV2 418 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MARC1Q5VT66 337 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 NUDT18Q6ZVK8 323 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 Q7L0L9 218 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 HOOK3Q86VS8 718 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ADGRG2Q8IZP9 1017 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MAML1Q92585 1016 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 BHMTQ93088 406 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SPON2Q9BUD6 331 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ACE2Q9BYF1 805 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 FOXP3Q9BZS1 431 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 GBA3Q9H227 469 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 NOL6Q9H6R4 1146 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 USP29Q9HBJ7 922 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 RSPH14Q9UHP6 348 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SLC25A13Q9UJS0 675 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 GGA2Q9UJY4 613 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 NEU2Q9Y3R4 380 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 DOCK6Q96HP0 2047 aa13.56□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CHD5Q8TDI0 1954 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ERI2A8K979 691 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ANHXE9PGG2 379 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 KCNK1O00180 336 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CBX4O00257 560 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 DNALI1O14645 258 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PSMD3O43242 534 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SEC31AO94979 1220 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PABPC1P11940 636 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PTPN3P26045 913 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 EIF2DP41214 584 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 CSKP41240 450 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TNNT3P45378 269 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MMP13P45452 471 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 DGKGP49619 791 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 VPS41P49754 854 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 PLK1P53350 603 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 BASP1P80723 227 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 SARNPP82979 210 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TNK2Q07912 1038 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 HTR4Q13639 388 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 LBRQ14739 615 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 MORF4L2Q15014 288 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 BRD3Q15059 726 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 TEX44Q53QW1 395 aa13.55□□□□□ -0.24
CDK5RAP3-205ENST00000577802 ANKRD20A2Q5SQ80 823 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms