RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PCDHGA5Q9Y5G8 931 aa19.79■□□□□ 0.76
SS18-208ENST00000577751 RALGAPA1Q6GYQ0 2036 aa19.79■□□□□ 0.76
SS18-208ENST00000577751 NUP205Q92621 2012 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 SDK1Q7Z5N4 2213 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 CXorf51AA0A1B0GTR3 108 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 MYO1FO00160 1098 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 MAP3K13O43283 966 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 LRP3O75074 770 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 SRCP12931 536 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 VAV1P15498 845 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 GLDCP23378 1020 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 ETFBP38117 255 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 ARF5P84085 180 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 DLG2Q15700 870 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 BOLA3Q53S33 107 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 LPCAT2Q7L5N7 544 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 HINFPQ9BQA5 517 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 NOL6Q9H6R4 1146 aaKnown RBP19.78■□□□□ 0.76
SS18-208ENST00000577751 CATSPERBQ9H7T0 1116 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 ATP13A1Q9HD20 1204 aa19.78■□□□□ 0.76
SS18-208ENST00000577751 WSB2Q9NYS7 404 aaPredicted RBP19.78■□□□□ 0.76
SS18-208ENST00000577751 EP300Q09472 2414 aaPredicted RBP19.78■□□□□ 0.76
SS18-208ENST00000577751 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 FGF10O15520 208 aaPredicted RBP19.77■□□□□ 0.76
SS18-208ENST00000577751 ACADMP11310 421 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 TCF4P15884 667 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 CD6P30203 668 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 OXTRP30559 389 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 ACVRL1P37023 503 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 ZNF135P52742 658 aaPredicted RBP19.77■□□□□ 0.76
SS18-208ENST00000577751 SLC20A2Q08357 652 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 ELAVL3Q14576 367 aaKnown RBP19.77■□□□□ 0.76
SS18-208ENST00000577751 ZNF776Q68DI1 518 aaPredicted RBP19.77■□□□□ 0.76
SS18-208ENST00000577751 TMEFF1Q8IYR6 380 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 GPR161Q8N6U8 529 aaKnown RBP19.77■□□□□ 0.76
SS18-208ENST00000577751 KCTD15Q96SI1 283 aaPredicted RBP19.77■□□□□ 0.76
SS18-208ENST00000577751 SPON2Q9BUD6 331 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 ARRDC1-AS1Q9H2J1 176 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 PARD6AQ9NPB6 346 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 CTTNBP2NLQ9P2B4 639 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 SCML1Q9UN30 329 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 FRYLO94915 3013 aa19.77■□□□□ 0.76
SS18-208ENST00000577751 BCLAF3A2AJT9 711 aaKnown RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 K7ERQ8 282 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 CBX4O00257 560 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 SMAD6O43541 496 aaKnown RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 RAMP2O60895 175 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 RNASEH1O60930 286 aaKnown RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 LCA5LO95447 670 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 CD160O95971 181 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 DNTTP04053 509 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 FECHP22830 423 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 HCAR3P49019 387 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 CLCN6P51797 869 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 YBEYP58557 167 aaPredicted RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 TPI1P60174 286 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 RPL6Q02878 288 aaKnown RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 SLC25A11Q02978 314 aaKnown RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 SPEM2Q0P670 501 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 POLD3Q15054 466 aaPredicted RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 ACCSLQ4AC99 568 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 KCNT1Q5JUK3 1230 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 PLA2G2CQ5R387 149 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 IL31Q6EBC2 164 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 RETSATQ6NUM9 610 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 LINGO4Q6UY18 593 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 CACUL1Q86Y37 369 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 UMODL1-AS1Q8N2C9 162 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 STK40Q8N2I9 435 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 ATP11CQ8NB49 1132 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 TEKT4Q8WW24 435 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 TOE1Q96GM8 510 aaKnown RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 ZNF419Q96HQ0 510 aaPredicted RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 PANX2Q96RD6 677 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 OSGEPQ9NPF4 335 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 INTUQ9ULD6 942 aa19.76■□□□□ 0.75
SS18-208ENST00000577751 PTPRZ1P23471 2315 aaPredicted RBP19.76■□□□□ 0.75
SS18-208ENST00000577751 EEF2KO00418 725 aaKnown RBP19.75■□□□□ 0.75
SS18-208ENST00000577751 PROSCO94903 275 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 RARAP10276 462 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 PTGER3P43115 390 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 SERPINH1P50454 418 aaKnown RBP19.75■□□□□ 0.75
SS18-208ENST00000577751 CST6Q15828 149 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 CSRP2Q16527 193 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 DPYSL2Q16555 572 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 TXNRD3NBQ6F5E7 133 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 MMAAQ8IVH4 418 aaKnown RBP19.75■□□□□ 0.75
SS18-208ENST00000577751 DONSONQ9NYP3 566 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 LCMT1Q9UIC8 334 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 GVINP1Q7Z2Y8 2422 aa19.75■□□□□ 0.75
SS18-208ENST00000577751 ZNF292O60281 2723 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 MCF2LO15068 1137 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 ALOX15BO15296 676 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 KDELR3O43731 214 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 ZNF821O75541 412 aaPredicted RBP19.74■□□□□ 0.75
SS18-208ENST00000577751 MTA2O94776 668 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 GOT1P17174 413 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 CDC25BP30305 580 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 SLC8A1P32418 973 aa19.74■□□□□ 0.75
SS18-208ENST00000577751 DHPSP49366 369 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms