RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 RIN3Q8TB24 985 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 TEKT5Q96M29 485 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 MYADMQ96S97 322 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 PNKPQ96T60 521 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 FAM83CQ9BQN1 747 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 TRIM51Q9BSJ1 452 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 C2orf49Q9BVC5 232 aaPredicted RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 PHACTR1Q9C0D0 580 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 POMKQ9H5K3 350 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 UBE2ZQ9H832 354 aaPredicted RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 SP110Q9HB58 689 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 TPX2Q9ULW0 747 aaKnown RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 SHOC2Q9UQ13 582 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 USP15Q9Y4E8 981 aaPredicted RBP15.61■□□□□ 0.09
SS18-206ENST00000577572 OR51B4Q9Y5P0 310 aa15.61■□□□□ 0.09
SS18-206ENST00000577572 DOCK4Q8N1I0 1966 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 ERI2A8K979 691 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 ANHXE9PGG2 379 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 DNALI1O14645 258 aaPredicted RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 TRDMT1O14717 391 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 CHADO15335 359 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 CACNG3O60359 315 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 MAP3K6O95382 1288 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 PSMC3P17980 439 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 CES1P23141 567 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 PTPN3P26045 913 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 HSPA9P38646 679 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 VIPR2P41587 438 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 RPL21P46778 160 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 SGSHP51688 502 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 GPS1Q13098 491 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 DHCR24Q15392 516 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 PREPLQ4J6C6 727 aaPredicted RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 ANKRD20A2Q5SQ80 823 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 ANKRD20A1Q5TYW2 823 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 ANKRD20A3Q5VUR7 823 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 EMBQ6PCB8 327 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 RHBDF2Q6PJF5 856 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 ARHGEF18Q6ZSZ5 1173 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 TMEM25Q86YD3 366 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 YAF2Q8IY57 180 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 PLCD3Q8N3E9 789 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 CARNMT1Q8N4J0 409 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 ART4Q93070 314 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 RSPRY1Q96DX4 576 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 LRRC3BQ96PB8 259 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 XPO6Q96QU8 1125 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 FEM1AQ9BSK4 669 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 BBS2Q9BXC9 721 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 EIF2B3Q9NR50 452 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 MTRF1LQ9UGC7 380 aaKnown RBP15.6■□□□□ 0.09
SS18-206ENST00000577572 FBXO10Q9UK96 956 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 SNX24Q9Y343 169 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 WNT6Q9Y6F9 365 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 C2orf16Q68DN1 1984 aa15.6■□□□□ 0.09
SS18-206ENST00000577572 GOLGA6CA6NDK9 693 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 GOLGA6BA6NDN3 693 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 PSMD3O43242 534 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 PEX11BO96011 259 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 GOLGA6DP0CG33 693 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 VASPP50552 380 aaPredicted RBP15.59■□□□□ 0.09
SS18-206ENST00000577572 VSNL1P62760 191 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 SULT2A1Q06520 285 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 SEMA5AQ13591 1074 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 LY6G5CQ5SRR4 150 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 MARC1Q5VT66 337 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 RNF219Q5W0B1 726 aaPredicted RBP15.59■□□□□ 0.09
SS18-206ENST00000577572 IL31Q6EBC2 164 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 TANGO2Q6ICL3 276 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 RETSATQ6NUM9 610 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 VITQ6UXI7 678 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 PPP1R21Q6ZMI0 780 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 TPGS1Q6ZTW0 290 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 TP53INP2Q8IXH6 220 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 KLHDC8BQ8IXV7 354 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 ZNF567Q8N184 647 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 CPA6Q8N4T0 437 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 HLA-CQ95604 372 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 EXOC4Q96A65 974 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 ALG14Q96F25 216 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 LMLNQ96KR4 655 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 FAM161BQ96MY7 647 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 MUC3BQ9H195 1237 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 LINC00597Q9H2U6 94 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 PDFQ9HBH1 243 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 ATP13A1Q9HD20 1204 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 GOLGA6AQ9NYA3 693 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 GRHL1Q9NZI5 618 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 KLHL8Q9P2G9 620 aaPredicted RBP15.59■□□□□ 0.09
SS18-206ENST00000577572 ANAPC5Q9UJX4 755 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 FAM50BQ9Y247 325 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 SLC27A6Q9Y2P4 619 aa15.59■□□□□ 0.09
SS18-206ENST00000577572 DOCK6Q96HP0 2047 aa15.58■□□□□ 0.09
SS18-206ENST00000577572 A0A0D9SEW6 157 aa15.58■□□□□ 0.08
SS18-206ENST00000577572 KCNK1O00180 336 aa15.58■□□□□ 0.08
SS18-206ENST00000577572 AP3B1O00203 1094 aa15.58■□□□□ 0.08
SS18-206ENST00000577572 NEBLO76041 1014 aa15.58■□□□□ 0.08
SS18-206ENST00000577572 JCHAINP01591 159 aa15.58■□□□□ 0.08
SS18-206ENST00000577572 ZSCAN5DPP0CG00 497 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms