RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 GPR12P47775 334 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 ALDH7A1P49419 539 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 BLKP51451 505 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 CLCNKBP51801 687 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 PROK1P58294 105 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 YWHAZP63104 245 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 MRPS21P82921 87 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 BYSLQ13895 437 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 GPR68Q15743 365 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 BAK1Q16611 211 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 CEP78Q5JTW2 689 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 TTLL5Q6EMB2 1281 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 AAGABQ6PD74 315 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 GJB7Q6PEY0 223 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 SLC30A9Q6PML9 568 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 RRM2BQ7LG56 351 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 MDGA2Q7Z553 956 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 DDIASQ8IXT1 998 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 SRRM1Q8IYB3 904 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 RFWD2Q8NHY2 731 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 BICD2Q8TD16 824 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 HDAC7Q8WUI4 952 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 DPF1Q92782 380 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 WDR83Q9BRX9 315 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 GPR63Q9BZJ6 419 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 PRDM13Q9H4Q3 707 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 STN1Q9H668 368 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 VEZTQ9HBM0 779 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 MOV10Q9HCE1 1003 aaKnown RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 FZD3Q9NPG1 666 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 DECR2Q9NUI1 292 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 BEX4Q9NWD9 120 aaPredicted RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 TMEM160Q9NX00 188 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 IFT80Q9P2H3 777 aaPredicted RBP2.75□□□□□ -1.97
COPS3-213ENST00000577210 KLHL13Q9P2N7 655 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 LAMP3Q9UQV4 416 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 CLDN16Q9Y5I7 305 aa2.75□□□□□ -1.97
COPS3-213ENST00000577210 A0A096LPK6 155 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 WIPF3A6NGB9 483 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 NPIPB13A6NJU9 1138 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 NPIPB5A8MRT5 1133 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 FOXO6A8MYZ6 492 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 NPIPB4C9JG80 1138 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 RHODO00212 210 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 DHX16O60231 1041 aaKnown RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 UGDHO60701 494 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 IL1AP01583 271 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 NHLRC4P0CG21 123 aaPredicted RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 IRF1P10914 325 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 C21orf58P58505 322 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 YPEL5P62699 121 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 RHAGQ02094 409 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ZNF91Q05481 1191 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 SRSF1Q07955 248 aaKnown RBP eCLIP2.74□□□□□ -1.97
COPS3-213ENST00000577210 PMPCAQ10713 525 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 LAMB3Q13751 1172 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 SEMA3AQ14563 771 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 SEC23BQ15437 767 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 NFIL3Q16649 462 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 CCDC142Q17RM4 750 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 AWAT1Q58HT5 328 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 KIAA1755Q5JYT7 1200 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 MTFR2Q6P444 385 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 LVRNQ6Q4G3 990 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ZNF66Q6ZN08 573 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 TFAP2DQ7Z6R9 452 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ADGRG6Q86SQ4 1221 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ARMC8Q8IUR7 673 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 VPS52Q8N1B4 723 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 GHDCQ8N2G8 530 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 SLC25A41Q8N5S1 370 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ESX1Q8N693 406 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ARFGAP1Q8N6T3 406 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 ARL14EPQ8N8R7 260 aaPredicted RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 EXD3Q8N9H8 876 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 C11orf65Q8NCR3 313 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 C16orf52Q8NHV5 167 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 TBC1D22AQ8WUA7 517 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 FAR1Q8WVX9 515 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 HSPH1Q92598 858 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 CNOT9Q92600 299 aaKnown RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 HTRA1Q92743 480 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 RPL36ALQ969Q0 106 aaKnown RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 RILPL2Q969X0 211 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 HVCN1Q96D96 273 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 INTS2Q9H0H0 1204 aaKnown RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 PDGFCQ9NRA1 345 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.74□□□□□ -1.97
COPS3-213ENST00000577210 TMEM248Q9NWD8 314 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 SAGE1Q9NXZ1 904 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 MAP3K20Q9NYL2 800 aaKnown RBP2.74□□□□□ -1.97
COPS3-213ENST00000577210 GRHL1Q9NZI5 618 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 HS3ST3B1Q9Y662 390 aa2.74□□□□□ -1.97
COPS3-213ENST00000577210 C17orf113A0A1B0GUU1 675 aa2.73□□□□□ -1.97
COPS3-213ENST00000577210 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.73□□□□□ -1.97
COPS3-213ENST00000577210 ARHGAP10A1A4S6 786 aa2.73□□□□□ -1.97
COPS3-213ENST00000577210 C16orf96A6NNT2 1141 aa2.73□□□□□ -1.97
COPS3-213ENST00000577210 KCNU1A8MYU2 1149 aa2.73□□□□□ -1.97
COPS3-213ENST00000577210 EPB41L2O43491 1005 aaKnown RBP2.73□□□□□ -1.97
COPS3-213ENST00000577210 TLX3O43711 291 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms