RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 ZNF177Q13360 481 aaPredicted RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 SERINC3Q13530 473 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 POLD3Q15054 466 aaPredicted RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 ALFQ53S48 1182 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TRMT10CQ7L0Y3 403 aaKnown RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TEX26Q8N6G2 289 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GLIS1Q8NBF1 620 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 ITFG1Q8TB96 612 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 SH3RF2Q8TEC5 729 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 NSMCE1Q8WV22 266 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 CPT1BQ92523 772 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 PRCCQ92733 491 aaPredicted RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 USP13Q92995 863 aaPredicted RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 LRRC39Q96DD0 335 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TCEAL4Q96EI5 215 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TEKT5Q96M29 485 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 TRIM31Q9BZY9 425 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 SLC39A8Q9C0K1 460 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GBA3Q9H227 469 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 ACBD3Q9H3P7 528 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 XAB2Q9HCS7 855 aaKnown RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 GOLGA6AQ9NYA3 693 aa12.73□□□□□ -0.37
TSEN54-204ENST00000577197 IPO11Q9UI26 975 aaKnown RBP12.73□□□□□ -0.37
TSEN54-204ENST00000577197 KIF26AQ9ULI4 1882 aaPredicted RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 E7ESA3 106 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 MAP2K7O14733 419 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 PRAMEF11O60813 436 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CNTN5O94779 1100 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 LUC7L3O95232 432 aaKnown RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CCNB1P14635 433 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 GJA1P17302 382 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CEBPBP17676 345 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CES1P23141 567 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 GGCXP38435 758 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 PAPOLAP51003 745 aaKnown RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 PLK1P53350 603 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 GEMIN4P57678 1058 aaKnown RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 GNA12Q03113 381 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 AAK1Q2M2I8 961 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 ALS2CLQ60I27 953 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 ALG1LQ6GMV1 187 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 GET4Q7L5D6 327 aaPredicted RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CROCCP2Q86T23 111 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CCDC117Q8IWD4 279 aaPredicted RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 NPAS3Q8IXF0 933 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 TDRD5Q8NAT2 981 aaKnown RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 FGF13Q92913 245 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 TTC25Q96NG3 672 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 FUT8Q9BYC5 575 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 ACE2Q9BYF1 805 aaPredicted RBP12.72□□□□□ -0.37
TSEN54-204ENST00000577197 SLC2A11Q9BYW1 496 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 POMKQ9H5K3 350 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 SMPD4Q9NXE4 827 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 C2orf16Q68DN1 1984 aa12.72□□□□□ -0.37
TSEN54-204ENST00000577197 GOLGA6L7A0A1B0GV03 622 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 DFFAO00273 331 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 SUN1O94901 812 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 PEX11BO96011 259 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 PENKP01210 267 aaPredicted RBP12.71□□□□□ -0.37
TSEN54-204ENST00000577197 IRF1P10914 325 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 MAGEA3P43357 314 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 ARL4CP56559 192 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 DMC1Q14565 340 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 CASP8Q14790 479 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 TRADDQ15628 312 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 SMAD2Q15796 467 aaKnown RBP12.71□□□□□ -0.37
TSEN54-204ENST00000577197 RALGPS1Q5JS13 557 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 CFAP58Q5T655 872 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 CXorf57Q6NSI4 855 aaKnown RBP12.71□□□□□ -0.37
TSEN54-204ENST00000577197 CENPUQ71F23 418 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 TFAP2DQ7Z6R9 452 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 PDIK1LQ8N165 341 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 ZNF567Q8N184 647 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 BBS5Q8N3I7 341 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 DCAF4L2Q8NA75 395 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 FIBINQ8TAL6 211 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 SMARCD2Q92925 531 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 ACDQ96AP0 544 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 FCRL5Q96RD9 977 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 NEUROG2Q9H2A3 272 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 PABPC3Q9H361 631 aaKnown RBP12.71□□□□□ -0.37
TSEN54-204ENST00000577197 PDFQ9HBH1 243 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 RAB6BQ9NRW1 208 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 VPS45Q9NRW7 570 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 NDFIP2Q9NV92 336 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 THEGQ9P2T0 379 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 HPCAL4Q9UM19 191 aa12.71□□□□□ -0.37
TSEN54-204ENST00000577197 AAR2Q9Y312 384 aaKnown RBP12.71□□□□□ -0.37
TSEN54-204ENST00000577197 NYNRINQ9P2P1 1898 aaKnown RBP12.71□□□□□ -0.37
TSEN54-204ENST00000577197 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.38
TSEN54-204ENST00000577197 DENND4AQ7Z401 1863 aa12.7□□□□□ -0.38
TSEN54-204ENST00000577197 NRG2O14511 850 aaPredicted RBP12.7□□□□□ -0.38
TSEN54-204ENST00000577197 KDELR3O43731 214 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms