RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 ACADMP11310 421 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 SRCP12931 536 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 HTR7P34969 479 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 SSR1P43307 286 aaKnown RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 POLD3Q15054 466 aaPredicted RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 SMTNL2Q2TAL5 461 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 PPP6R3Q5H9R7 873 aaPredicted RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 C11orf74Q86VG3 221 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 CACUL1Q86Y37 369 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 TMTC1Q8IUR5 882 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 DEFB119Q8N690 84 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 ATP11CQ8NB49 1132 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 HSPH1Q92598 858 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 EIF3CQ99613 913 aaKnown RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 RSPH9Q9H1X1 276 aaPredicted RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 NOL6Q9H6R4 1146 aaKnown RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 FBRSQ9HAH7 460 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 CWC15Q9P013 229 aaKnown RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 USP36Q9P275 1121 aaKnown RBP16.06■□□□□ 0.16
NCBP3-207ENST00000577169 GMEB2Q9UKD1 530 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 INTUQ9ULD6 942 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 HS3ST2Q9Y278 367 aa16.06■□□□□ 0.16
NCBP3-207ENST00000577169 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 TMEM110-MUSTN1A8MSY1 372 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 SMAD6O43541 496 aaKnown RBP16.05■□□□□ 0.16
NCBP3-207ENST00000577169 RAMP2O60895 175 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 LCA5LO95447 670 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 RETP07949 1114 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 C7P10643 843 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 GOT1P17174 413 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ERCC2P18074 760 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 FECHP22830 423 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 CYLC1P35663 651 aaPredicted RBP16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ETFBP38117 255 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 HCAR3P49019 387 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 TPMTP51580 245 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ARF5P84085 180 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 SLC25A11Q02978 314 aaKnown RBP16.05■□□□□ 0.16
NCBP3-207ENST00000577169 SLC20A2Q08357 652 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 MESDQ14696 234 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ELF2Q15723 593 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 HADHQ16836 314 aaKnown RBP16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ATP13A4Q4VNC1 1196 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ZNF776Q68DI1 518 aaPredicted RBP16.05■□□□□ 0.16
NCBP3-207ENST00000577169 SLC36A4Q6YBV0 504 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 TMEFF1Q8IYR6 380 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 LOXL4Q96JB6 756 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 IMPACTQ9P2X3 320 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 PCDHA13Q9Y5I0 950 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 ACTL7AQ9Y615 435 aa16.05■□□□□ 0.16
NCBP3-207ENST00000577169 EPN1Q9Y6I3 576 aaPredicted RBP16.05■□□□□ 0.16
NCBP3-207ENST00000577169 SOWAHDA6NJG2 315 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 RASA4BC9J798 803 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 FGF10O15520 208 aaPredicted RBP16.04■□□□□ 0.16
NCBP3-207ENST00000577169 RASA4O43374 803 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 KDELR3O43731 214 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 BNIP3LO60238 219 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 RNASEH1O60930 286 aaKnown RBP16.04■□□□□ 0.16
NCBP3-207ENST00000577169 CD160O95971 181 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 DNTTP04053 509 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 YBEYP58557 167 aaPredicted RBP16.04■□□□□ 0.16
NCBP3-207ENST00000577169 TAS2R40P59535 323 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 SPA17Q15506 151 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 PMS2CLQ68D20 193 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 RETSATQ6NUM9 610 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 RFX8Q6ZV50 586 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 LPCAT2Q7L5N7 544 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 ZNF354CQ86Y25 554 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 MMAAQ8IVH4 418 aaKnown RBP16.04■□□□□ 0.16
NCBP3-207ENST00000577169 RHOT2Q8IXI1 618 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 UMODL1-AS1Q8N2C9 162 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 TEKT4Q8WW24 435 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 KLC2Q9H0B6 622 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 ARRDC1-AS1Q9H2J1 176 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
NCBP3-207ENST00000577169 LCMT1Q9UIC8 334 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 HPCAL4Q9UM19 191 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 NUP205Q92621 2012 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 CHD5Q8TDI0 1954 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
NCBP3-207ENST00000577169 H3BRJ5 948 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 NDUFS2O75306 463 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 MTA2O94776 668 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 AMPD1P23109 780 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 CD6P30203 668 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 OXTRP30559 389 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 SLC8A1P32418 973 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 ARHGAP25P42331 645 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 DHPSP49366 369 aaPredicted RBP16.03■□□□□ 0.16
NCBP3-207ENST00000577169 ZNF135P52742 658 aaPredicted RBP16.03■□□□□ 0.16
NCBP3-207ENST00000577169 RPL6Q02878 288 aaKnown RBP16.03■□□□□ 0.16
NCBP3-207ENST00000577169 ZBTB16Q05516 673 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 SPEM2Q0P670 501 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 TCEAL1Q15170 157 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 DPYSL2Q16555 572 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 RAD9BQ6WBX8 426 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 LEKR1Q6ZMV7 388 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 Q6ZVU0 165 aa16.03■□□□□ 0.16
NCBP3-207ENST00000577169 POLNQ7Z5Q5 900 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms