RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 SIK2Q9H0K1 926 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 TNKS2Q9H2K2 1166 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 THAP9Q9H5L6 903 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 GDF3Q9NR23 364 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 PPM1HQ9ULR3 514 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 SCML1Q9UN30 329 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 CFAP46Q8IYW2 2715 aa12.37□□□□□ -0.43
PRPF8-215ENST00000576958 A0A1B0GVM2 712 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 SLC31A1O15431 190 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 MOCS3O95396 460 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 ADH1BP00325 375 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 GIMD1P0DJR0 217 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 SRCP12931 536 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 PON1P27169 355 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 CLCN1P35523 988 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 ACADSBP45954 432 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 PLK1P53350 603 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 RNASE9P60153 205 aaKnown RBP12.36□□□□□ -0.43
PRPF8-215ENST00000576958 NUCB2P80303 420 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 ZNF542PQ5EBM4 170 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 TPRG1LQ5T0D9 272 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 SEL1L3Q68CR1 1132 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 NAPEPLDQ6IQ20 393 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 BEND5Q7L4P6 421 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 PDCD7Q8N8D1 485 aaKnown RBP12.36□□□□□ -0.43
PRPF8-215ENST00000576958 ATP6V0D2Q8N8Y2 350 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 STK32AQ8WU08 396 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 SPAG5Q96R06 1193 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
PRPF8-215ENST00000576958 MPP6Q9NZW5 540 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 DKK4Q9UBT3 224 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 ZFR2Q9UPR6 939 aaKnown RBP12.36□□□□□ -0.43
PRPF8-215ENST00000576958 PCDHB1Q9Y5F3 818 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
PRPF8-215ENST00000576958 ATMQ13315 3056 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 A0A087WV48 116 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 M0QYT0 321 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 FOXN3O00409 490 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-215ENST00000576958 FFAR2O15552 330 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SIGLEC6O43699 453 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 ATP9BO43861 1147 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 RNGTTO60942 597 aaKnown RBP12.35□□□□□ -0.43
PRPF8-215ENST00000576958 C1QL1O75973 258 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 JUPP14923 745 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 CDK17Q00537 523 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-215ENST00000576958 CETN1Q12798 172 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 FGL2Q14314 439 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 PROX2Q3B8N5 592 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 TFAP2DQ7Z6R9 452 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 CCDC117Q8IWD4 279 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SLC22A18ASQ8N1D0 253 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 NETO2Q8NC67 525 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 OR7D4Q8NG98 312 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 OR2A12Q8NGT7 310 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 GRIN3AQ8TCU5 1115 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SHC3Q92529 594 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 CCDC34Q96HJ3 373 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.35□□□□□ -0.43
PRPF8-215ENST00000576958 VPS51Q9UID3 782 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 VPS28Q9UK41 221 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 GTF3C3Q9Y5Q9 886 aa12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SETXQ7Z333 2677 aaKnown RBP12.35□□□□□ -0.43
PRPF8-215ENST00000576958 SHROOM3Q8TF72 1996 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 COL27A1Q8IZC6 1860 aaPredicted RBP12.34□□□□□ -0.43
PRPF8-215ENST00000576958 HELZ2Q9BYK8 2649 aaKnown RBP12.34□□□□□ -0.43
PRPF8-215ENST00000576958 LY6G6EA0A0G2JKS1 128 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 A0A1W2PQU0 124 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 BICDL2A1A5D9 508 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 PMS2P1A4D2B8 440 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 MCF2LO15068 1137 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 RAD51BO15315 384 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 SART1O43290 800 aaKnown RBP12.34□□□□□ -0.43
PRPF8-215ENST00000576958 MED7O43513 233 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 ZNF821O75541 412 aaPredicted RBP12.34□□□□□ -0.43
PRPF8-215ENST00000576958 DAB1O75553 588 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 NEBLO76041 1014 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 GKP32189 559 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 CCR1P32246 355 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 RABGAP1LQ5R372 815 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 GCNT7Q6ZNI0 430 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 NYAP1Q6ZVC0 841 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 TMC6Q7Z403 805 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 PHLDB2Q86SQ0 1253 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 TMPRSS12Q86WS5 348 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 OR13H1Q8NG92 308 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 OR8D1Q8WZ84 308 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 TBCBQ99426 244 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 TKTL2Q9H0I9 626 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 MUC3BQ9H195 1237 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 GGT7Q9UJ14 662 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 DNAJC12Q9UKB3 198 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 U3KQA8 63 aa12.34□□□□□ -0.43
PRPF8-215ENST00000576958 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms