RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 NIPAL1Q6NVV3 410 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 FAM160B2Q86V87 743 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CPSF7Q8N684 471 aaKnown RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 SLC15A4Q8N697 577 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CHPT1Q8WUD6 406 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 ARNTL2Q8WYA1 636 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 ATP6V0A1Q93050 837 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 MCRS1Q96EZ8 462 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CEP41Q9BYV8 373 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 TRPC7Q9HCX4 862 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 SMOXQ9NWM0 555 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CNOT6Q9ULM6 557 aaKnown RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 PCDHGA7Q9Y5G6 932 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 RGPD3A6NKT7 1758 aaPredicted RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 RGPD4Q7Z3J3 1758 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 TMEM114B3SHH9 223 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 TCP10L2B9ZVM9 353 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 H0YCG3 227 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 M0QYV0 167 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 OXSR1O95747 527 aaPredicted RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 ZNF182P17025 639 aaPredicted RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 HDCP19113 662 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 TFE3P19532 575 aaPredicted RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 PRKCQQ04759 706 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 TRAF2Q12933 501 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 ARL13AQ5H913 290 aaPredicted RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 SLC27A3Q5K4L6 730 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 ANKRD26P1Q6NSI1 321 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CYS1Q717R9 158 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 ILDR2Q71H61 639 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CCDC80Q76M96 950 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CCDC97Q96F63 343 aaPredicted RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 TWNKQ96RR1 684 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CNPY3Q9BT09 278 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 ZNF385DQ9H6B1 395 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 FEM1BQ9UK73 627 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 CDYLQ9Y232 598 aa14.67□□□□□ -0.06
SMG6-215ENST00000574501 RBMX2Q9Y388 322 aaKnown RBP14.67□□□□□ -0.06
SMG6-215ENST00000574501 A0A096LPK6 155 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 ZNF839A8K0R7 811 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 KPNA7A9QM74 516 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 ZNF701M0R085 212 aaPredicted RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 NRP1O14786 923 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 MED7O43513 233 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 AKAP10O43572 662 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 TADA2AO75478 443 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 GCATO75600 419 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 SULT1C4O75897 302 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 MICAL2O94851 1124 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 CAP2P40123 477 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 GRIA4P48058 902 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 OLIG2Q13516 323 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 OR6B2Q6IFH4 312 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 SLC2A7Q6PXP3 512 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 CHST15Q7LFX5 561 aaPredicted RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 SLC7A5P1Q8MH63 180 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 SYBUQ9NX95 663 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 TK2O00142 265 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 KRT19P08727 400 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 ARSAP15289 507 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 NFKBIAP25963 317 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 GP5P40197 560 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 PDK2Q15119 407 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 ARHGEF16Q5VV41 709 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 FSTL4Q6MZW2 842 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 WDR49Q8IV35 697 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 CDKL3Q8IVW4 592 aaPredicted RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 ZC3H7AQ8IWR0 971 aaKnown RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 CASP10Q92851 521 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 AGAP2Q99490 1192 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 MPHOSPH6Q99547 160 aaKnown RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 PDCD2LQ9BRP1 358 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 ZNF341Q9BYN7 854 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 DEFB129Q9H1M3 183 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 POLR1BQ9H9Y6 1135 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 NMRAL1Q9HBL8 299 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 GMPR2Q9P2T1 348 aaKnown RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 IPO11Q9UI26 975 aaKnown RBP14.66□□□□□ -0.06
SMG6-215ENST00000574501 RAP2CQ9Y3L5 183 aa14.66□□□□□ -0.06
SMG6-215ENST00000574501 PRORSD1PA6NEY8 169 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 C2CD4BA6NLJ0 364 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 FAM155AB1AL88 458 aaPredicted RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 TMEM233B4DJY2 109 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 BAIAP3O94812 1187 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 GARSP41250 739 aaKnown RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 NAGLUP54802 743 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 OSTNP61366 133 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 SEMA5AQ13591 1074 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 RFTN1Q14699 578 aaPredicted RBP14.65□□□□□ -0.06
SMG6-215ENST00000574501 NEDD8Q15843 81 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 MOGQ16653 247 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 DUOXA2Q1HG44 320 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 RGS21Q2M5E4 152 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 LAYNQ6UX15 382 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 STRA8Q7Z7C7 330 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 MCF2L2Q86YR7 1114 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 BRSK2Q8IWQ3 736 aa14.65□□□□□ -0.06
SMG6-215ENST00000574501 CBR4Q8N4T8 237 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms