RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 GGA2Q9UJY4 613 aa12.19□□□□□ -0.46
NDE1-206ENST00000572967 PILRBQ9UKJ0 227 aa12.19□□□□□ -0.46
NDE1-206ENST00000572967 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
NDE1-206ENST00000572967 ALG6Q9Y672 507 aa12.19□□□□□ -0.46
NDE1-206ENST00000572967 TMEM131Q92545 1883 aa12.19□□□□□ -0.46
NDE1-206ENST00000572967 TYW5A2RUC4 315 aaKnown RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 CTAGE9A4FU28 777 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 USP27XA6NNY8 438 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 MEI4A8MW99 385 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 ESPNB1AK53 854 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 CDX4O14627 284 aaPredicted RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 TM4SF5O14894 197 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 NDUFS2O75306 463 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 KCNK5O95279 499 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 PABPC1P11940 636 aaKnown RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 CTNNA2P26232 953 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 MIPP30301 263 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 HDAC4P56524 1084 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 ETF1P62495 437 aaKnown RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 OGDHQ02218 1023 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 ZNF252P-AS1Q0IIN9 211 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 RPS6KA1Q15418 735 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 ADGRF1Q5T601 910 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 N4BP2L1Q5TBK1 243 aaPredicted RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 SH3PXD2AQ5TCZ1 1133 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 DAB2IPQ5VWQ8 1189 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 PEAR1Q5VY43 1037 aaPredicted RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 BNIPLQ7Z465 357 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 MFN1Q8IWA4 741 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 RGL4Q8IZJ4 473 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 AHI1Q8N157 1196 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 OR2I1PQ8NGU4 316 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 AZIN2Q96A70 460 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 MYEOVQ96EZ4 313 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 BTBD6Q96KE9 485 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 FCRL2Q96LA5 508 aaPredicted RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 GTPBP2Q9BX10 602 aaKnown RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 IRX2Q9BZI1 471 aaPredicted RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 TRIM7Q9C029 511 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 PIGVQ9NUD9 493 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 STIM2Q9P246 746 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 XPO7Q9UIA9 1087 aaKnown RBP12.18□□□□□ -0.46
NDE1-206ENST00000572967 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 STOML2Q9UJZ1 356 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 PLXNA2O75051 1894 aa12.18□□□□□ -0.46
NDE1-206ENST00000572967 NPC1O15118 1278 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 ACSL4O60488 711 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 CD6P30203 668 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 CD70P32970 193 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 CTNNA1P35221 906 aaKnown RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 ARL4AP40617 200 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 COPAP53621 1224 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 RWDD2BP57060 319 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 PITX1P78337 314 aaPredicted RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 LMAN2Q12907 356 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 ENPP2Q13822 863 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 KRT81Q14533 505 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 PDK2Q15119 407 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 SPDYCQ5MJ68 293 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 TRNP1Q6NT89 227 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 LRRC31Q6UY01 552 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 FAM124AQ86V42 546 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 FAM131BQ86XD5 332 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 VSIG1Q86XK7 387 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 HJURPQ8NCD3 748 aaPredicted RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 WFIKKN2Q8TEU8 576 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 PRCCQ92733 491 aaPredicted RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 TMA16Q96EY4 203 aaKnown RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 HAPLN3Q96S86 360 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 NAPGQ99747 312 aaPredicted RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 EPAS1Q99814 870 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 SLC2A11Q9BYW1 496 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 ZWILCHQ9H900 591 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 ARHGEF38Q9NXL2 777 aa12.17□□□□□ -0.46
NDE1-206ENST00000572967 USP36Q9P275 1121 aaKnown RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 RCOR3Q9P2K3 495 aaPredicted RBP12.17□□□□□ -0.46
NDE1-206ENST00000572967 A0A0U1RQJ8 604 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 H3BRJ5 948 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 FTCDO95954 541 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 KRT1P04264 644 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 ACADMP11310 421 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 TCP1P17987 556 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 MAOBP27338 520 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 PMLP29590 882 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 CASQ1P31415 396 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 ADRA1BP35368 520 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 HOXD12P35452 270 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 GJC1P36383 396 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 DPP6P42658 865 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 NUMBP49757 651 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 TPMTP51580 245 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 ATXN3P54252 364 aaPredicted RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 RPS24P62847 133 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 SLC25A11Q02978 314 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 CDH18Q13634 790 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 DUOXA1Q1HG43 343 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 ZC3H12AQ5D1E8 599 aaKnown RBP12.16□□□□□ -0.46
NDE1-206ENST00000572967 ERMARDQ5T6L9 678 aa12.16□□□□□ -0.46
NDE1-206ENST00000572967 SEL1L2Q5TEA6 688 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms