RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 ZSCAN32Q9NX65 697 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 MBD1Q9UIS9 605 aaPredicted RBP7.16□□□□□ -1.26
SMG6-209ENST00000571442 VPS28Q9UK41 221 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 INTUQ9ULD6 942 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 THADAQ6YHU6 1953 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 SHROOM3Q8TF72 1996 aa7.16□□□□□ -1.26
SMG6-209ENST00000571442 DOCK9Q9BZ29 2069 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 SPTBN2O15020 2390 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 GOLGA6L3A6NEY3 463 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 C3orf70A6NLC5 250 aaPredicted RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 RASA4BC9J798 803 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 PLK4O00444 970 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 RASA4O43374 803 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 BUB1O43683 1085 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 ATP9BO43861 1147 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 ASLP04424 464 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 ATP5BP06576 529 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 CTSLP07711 333 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 SRPRAP08240 638 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 COMTP21964 271 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 MAN1A1P33908 653 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 CYLC1P35663 651 aaPredicted RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 MAPKAPK2P49137 400 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 AIF1P55008 147 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 RPS14P62263 151 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 SLC12A1Q13621 1099 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 DPYSL3Q14195 570 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 HNRNPA1L2Q32P51 320 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 C6orf118Q5T5N4 469 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 AFMIDQ63HM1 303 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 ZC3H14Q6PJT7 736 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 RFX8Q6ZV50 586 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 NUDT18Q6ZVK8 323 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 Q6ZVU0 165 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 TRMT11Q7Z4G4 463 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 KBTBD6Q86V97 674 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 TMPRSS6Q8IU80 811 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 RHOT2Q8IXI1 618 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 STK40Q8N2I9 435 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 SH2D3CQ8N5H7 860 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 CAMKK1Q8N5S9 505 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 DCAF4L2Q8NA75 395 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 CHST14Q8NCH0 376 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 TPCN2Q8NHX9 752 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 UCMAQ8WVF2 138 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 TEKT4Q8WW24 435 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 NSMCE3Q96MG7 304 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 CSPG4P5Q96PW8 444 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 FAM129BQ96TA1 746 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 EPAS1Q99814 870 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 HINFPQ9BQA5 517 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 SPON2Q9BUD6 331 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 LRRC19Q9H756 370 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 ATP13A1Q9HD20 1204 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 POLMQ9NP87 494 aaPredicted RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 TMEM51Q9NW97 253 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 SERGEFQ9UGK8 458 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 SARDHQ9UL12 918 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 FCF1Q9Y324 198 aaKnown RBP7.15□□□□□ -1.26
SMG6-209ENST00000571442 PCDHGA2Q9Y5H1 932 aa7.15□□□□□ -1.26
SMG6-209ENST00000571442 IGHV1OR15-9A0A0B4J2B8 117 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 GRID2IPA4D2P6 1211 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 J3KR12 359 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 CBX4O00257 560 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 PJA2O43164 708 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 RAMP2O60895 175 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 GJB3O75712 270 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 MAP3K6O95382 1288 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 MOCS3O95396 460 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 C7P10643 843 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 TNNT1P13805 278 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 GKP32189 559 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 P2RY2P41231 377 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ARHGAP25P42331 645 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 SSR1P43307 286 aaKnown RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 NOP2P46087 812 aaKnown RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 RGRP47804 291 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 VAV2P52735 878 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 HADHBP55084 474 aaKnown RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 CDH6P55285 790 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ADCY2Q08462 1091 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 POLD3Q15054 466 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 LLGL1Q15334 1064 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 SPA17Q15506 151 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 DLG2Q15700 870 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 BOLA3Q53S33 107 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ACBD5Q5T8D3 534 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 NCBP2-AS2Q69YL0 99 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 IL31Q6EBC2 164 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 KIAA1324Q6UXG2 1013 aaKnown RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 PSTKQ8IV42 348 aaKnown RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 CCDC117Q8IWD4 279 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 LRRC8AQ8IWT6 810 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 UMODL1-AS1Q8N2C9 162 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 DCLK2Q8N568 766 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 DEFB119Q8N690 84 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 PQLC3Q8N755 202 aa7.14□□□□□ -1.27
SMG6-209ENST00000571442 ZNF557Q8N988 423 aaPredicted RBP7.14□□□□□ -1.27
SMG6-209ENST00000571442 OR2T3Q8NH03 318 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms