RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PPM1HQ9ULR3 514 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 IGSF10Q6WRI0 2623 aa8.85□□□□□ -0.99
CTDNEP1-203ENST00000570385 C10orf142B7Z368 130 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 FOXN3O00409 490 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 KPNA3O00505 521 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 LATO43561 262 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 PLRG1O43660 514 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 ATP9BO43861 1147 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 ADCY5O95622 1261 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 FGFR1OPO95684 399 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 CTSLP07711 333 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 RRM1P23921 792 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 PON1P27169 355 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 ITPKBP27987 946 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 KRT9P35527 623 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 MTIF2P46199 727 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 ACADVLP49748 655 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 PLK1P53350 603 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 PTK2Q05397 1052 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 SLC12A1Q13621 1099 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 STAT4Q14765 748 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 EXOC3L4Q17RC7 722 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 ALFQ53S48 1182 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 C2CD6Q53TS8 623 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 HSP90AA4PQ58FG1 418 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 TTC39BQ5VTQ0 682 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 OTUD1Q5VV17 481 aaPredicted RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 FAM46CQ5VWP2 391 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 OLFML1Q6UWY5 402 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 LINGO4Q6UY18 593 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 TFAP2DQ7Z6R9 452 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 DSG4Q86SJ6 1040 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 IRF2BP1Q8IU81 584 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 MFSD2AQ8NA29 543 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 ATP11CQ8NB49 1132 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 SHC3Q92529 594 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 TNKS2Q9H2K2 1166 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 SIX2Q9NPC8 291 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 FZD3Q9NPG1 666 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 PIGVQ9NUD9 493 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 MPP6Q9NZW5 540 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 NYNRINQ9P2P1 1898 aaKnown RBP8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 DKK4Q9UBT3 224 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 DNAJC12Q9UKB3 198 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 OR51B4Q9Y5P0 310 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 AK5Q9Y6K8 562 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 LAMA5O15230 3695 aa8.84□□□□□ -0.99
CTDNEP1-203ENST00000570385 MYLKQ15746 1914 aa8.84□□□□□ -1
CTDNEP1-203ENST00000570385 ITPR1Q14643 2758 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 A0A0D9SEW6 157 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 A0A1W2PQU0 124 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 C1QTNF3-AMACRE9PGA6 284 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 I6L893 689 aaPredicted RBP8.83□□□□□ -1
CTDNEP1-203ENST00000570385 TRIM38O00635 465 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 MCF2LO15068 1137 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 FFAR2O15552 330 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SMAD6O43541 496 aaKnown RBP8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SIGLEC6O43699 453 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 RNGTTO60942 597 aaKnown RBP8.83□□□□□ -1
CTDNEP1-203ENST00000570385 DAB1O75553 588 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 RHOCP08134 193 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 GLI1P08151 1106 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SRCP12931 536 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 MYF5P13349 255 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 GLDCP23378 1020 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 CLCN1P35523 988 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 HNF1BP35680 557 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SULT1E1P49888 294 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 OXCT1P55809 520 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 CLDN2P57739 230 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 TAS2R38P59533 333 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SLC6A3Q01959 620 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 MEA1Q16626 185 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 ZNF542PQ5EBM4 170 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 C6orf118Q5T5N4 469 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 TAF3Q5VWG9 929 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SH2D3CQ8N5H7 860 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 CHST14Q8NCH0 376 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 OR7D4Q8NG98 312 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 GRIN3AQ8TCU5 1115 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 TSC1Q92574 1164 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 ARRDC3Q96B67 414 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 KLHDC7BQ96G42 594 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 NOX5Q96PH1 765 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 PSMB7Q99436 277 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SPON2Q9BUD6 331 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 TKTL2Q9H0I9 626 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 PDCL3Q9H2J4 239 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 WDCPQ9H6R7 721 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 ASNSD1Q9NWL6 643 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 PCDHGA1Q9Y5H4 931 aa8.83□□□□□ -1
CTDNEP1-203ENST00000570385 SHROOM3Q8TF72 1996 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 TRPM6Q9BX84 2022 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 A0A087WV48 116 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 PRAMEF26H0Y7S4 382 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 GOLGA8SH3BPF8 625 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 YKT6O15498 198 aa8.82□□□□□ -1
CTDNEP1-203ENST00000570385 SLC7A4O43246 635 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms