RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TNFSF4P23510 183 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 TRA2BP62995 288 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 GRB10Q13322 594 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PDGFRLQ15198 375 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 ATF7IP2Q5U623 682 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 FAM171A1Q5VUB5 890 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 IYDQ6PHW0 289 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 RAB11FIP2Q7L804 512 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 GALNT12Q8IXK2 581 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 GDAP1Q8TB36 358 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 NANOS1Q8WY41 292 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 USP7Q93009 1102 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 LXNQ9BS40 222 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 ZNF446Q9NWS9 450 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 CFL2Q9Y281 166 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 RLFQ13129 1914 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 SCAMP1O15126 338 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 SYPP08247 313 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 DARSP14868 501 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 PRCPP42785 496 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 MSH2P43246 934 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 RPIAP49247 311 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 PPP5CP53041 499 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 VBP1P61758 197 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 MYL5Q02045 173 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 UGP2Q16851 508 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 MGAT5BQ3V5L5 792 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 FBXO47Q5MNV8 452 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 ALG1LQ6GMV1 187 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 BRICD5Q6PL45 260 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PRR23BQ6ZRT6 265 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 GPBP1Q86WP2 473 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PTRH1Q86Y79 214 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 IGSF22Q8N9C0 903 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 KREMEN2Q8NCW0 462 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 HUS1BQ8NHY5 278 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 LRRC8CQ8TDW0 803 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 FAM216AQ8WUB2 273 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 RBM41Q96IZ5 413 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 GHITMQ9H3K2 345 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 NOL6Q9H6R4 1146 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 POLD4Q9HCU8 107 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 FAM114A2Q9NRY5 505 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 IPO11Q9UI26 975 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 L1RE1Q9UN81 338 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 MSRB2Q9Y3D2 182 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 TRAV19A0A0A6YYK7 116 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 OR6C65A6NJZ3 312 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PRR33A8MZF0 331 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 SMAD9O15198 467 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 EIF3DO15371 548 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMG1-217ENST00000569764 PEX11AO75192 247 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PGM3O95394 542 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 CKMP06732 381 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 EDN3P14138 238 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 MLH1P40692 756 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 BPIFB4P59827 614 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 ARHGAP1Q07960 439 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 NNTQ13423 1086 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 AASDHQ4L235 1098 aaPredicted RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 E4F1Q66K89 784 aaPredicted RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 MAEAQ7L5Y9 396 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PIWIL3Q7Z3Z3 882 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 NLRP8Q86W28 1048 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 P3H2Q8IVL5 708 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 CMIPQ8IY22 773 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 DACT3Q96B18 629 aaPredicted RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 LENG9Q96B70 501 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 TBC1D10AQ9BXI6 508 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 NUSAP1Q9BXS6 441 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 EVA1AQ9H8M9 152 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 PRDM6Q9NQX0 595 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 DDX28Q9NUL7 540 aaKnown RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 FAM105AQ9NUU6 356 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 ZNF510Q9Y2H8 683 aa6.8□□□□□ -1.32
SMG1-217ENST00000569764 COL11A1P12107 1806 aaPredicted RBP6.8□□□□□ -1.32
SMG1-217ENST00000569764 PSMD9O00233 223 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 MEIS1O00470 390 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TMCC1O94876 653 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 LUC7L3O95232 432 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 TKTP29401 623 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 YWHAHQ04917 246 aaPredicted RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 TRIM32Q13049 653 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 ZNF667Q5HYK9 610 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SPECC1LQ69YQ0 1117 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 HDXQ7Z353 690 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TMEM86AQ8N2M4 240 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 PIK3C3Q8NEB9 887 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 CCDC112Q8NEF3 446 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 SPPL2BQ8TCT7 592 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 LMBR1Q8WVP7 490 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TOP1MTQ969P6 601 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 TTC1Q99614 292 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 EIF2AQ9BY44 585 aaKnown RBP6.79□□□□□ -1.32
SMG1-217ENST00000569764 PBX4Q9BYU1 374 aa6.79□□□□□ -1.32
SMG1-217ENST00000569764 FBRSL1Q9HCM7 1045 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms