RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MRPL42Q9Y6G3 142 aaKnown RBP18.5■□□□□ 0.55
SMPD3-211ENST00000568373 GREB1Q4ZG55 1949 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 SCN5AQ14524 2016 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 TBKBP1A7MCY6 615 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 ANXA9O76027 345 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 IL1BP01584 269 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 DNAJB2P25686 324 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 PBX3P40426 434 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 TAF10Q12962 218 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 SETDB1Q15047 1291 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 SMAD1Q15797 465 aaKnown RBP18.49■□□□□ 0.55
SMPD3-211ENST00000568373 TMEM173Q86WV6 379 aaPredicted RBP18.49■□□□□ 0.55
SMPD3-211ENST00000568373 ZNF683Q8IZ20 524 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 DOCK4Q8N1I0 1966 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 SPATA22Q8NHS9 363 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 GLOD4Q9HC38 313 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 SLC40A1Q9NP59 571 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 OLA1Q9NTK5 396 aaKnown RBP18.49■□□□□ 0.55
SMPD3-211ENST00000568373 SOX13Q9UN79 622 aa18.49■□□□□ 0.55
SMPD3-211ENST00000568373 H7C4K7 107 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TPP1O14773 563 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 HGSO14964 777 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 DCTN3O75935 186 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TBX18O95935 607 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 PAPOLAP51003 745 aaKnown RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TRIP4Q15650 581 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 MS4A13Q5J8X5 152 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 GRTP1Q5TC63 336 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 ANKS3Q6ZW76 656 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TRIM42Q8IWZ5 723 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 MFSD3Q96ES6 412 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 SCLYQ96I15 445 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 LRRC37BQ96QE4 947 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 PRDM5Q9NQX1 630 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 SAGE1Q9NXZ1 904 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 CHKBQ9Y259 395 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 RASSF9O75901 435 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 HAPLN1P10915 354 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TPH1P17752 444 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 NCALDP61601 193 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 OVGP1Q12889 678 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 PSMD5Q16401 504 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 UMODL1-AS1Q8N2C9 162 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 ATP6V0D2Q8N8Y2 350 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 BTN2A3PQ96KV6 586 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 PPP1R2P1Q96PQ5 205 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TTPALQ9BTX7 342 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 MECRQ9BV79 373 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 OXCT2Q9BYC2 517 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TRIM55Q9BYV6 548 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 NOL6Q9H6R4 1146 aaKnown RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 ECT2Q9H8V3 914 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 CHRAC1Q9NRG0 131 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 COMMD8Q9NX08 183 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 MARCH2Q9P0N8 246 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 SIRPGQ9P1W8 387 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 PPARGC1AQ9UBK2 798 aaKnown RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 MAGED2Q9UNF1 606 aaPredicted RBP18.48■□□□□ 0.55
SMPD3-211ENST00000568373 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
SMPD3-211ENST00000568373 MKI67P46013 3256 aaKnown RBP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 C2CD2LO14523 706 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 TGDSO95455 350 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 MT-CYBP00156 380 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 RHOQP17081 205 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 PDE1BQ01064 536 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 DUSP4Q13115 394 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 PDE1CQ14123 709 aaPredicted RBP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 C10orf120Q5SQS8 335 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 RASIP1Q5U651 963 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 KYAT3Q6YP21 454 aaKnown RBP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 MIB1Q86YT6 1006 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 C2orf15Q8WU43 125 aaKnown RBP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 DEFB118Q96PH6 123 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 TBL1YQ9BQ87 522 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 ZYG11BQ9C0D3 744 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 RBM22Q9NW64 420 aaKnown RBP eCLIP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 DONSONQ9NYP3 566 aa18.47■□□□□ 0.55
SMPD3-211ENST00000568373 IPO11Q9UI26 975 aaKnown RBP18.47■□□□□ 0.55
SMPD3-211ENST00000568373 TOP3BO95985 862 aaKnown RBP18.46■□□□□ 0.55
SMPD3-211ENST00000568373 MYCP01106 439 aaPredicted RBP18.46■□□□□ 0.55
SMPD3-211ENST00000568373 CXCL10P02778 98 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 HLA-DQB2P05538 268 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 NDST2P52849 883 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 ANO4Q32M45 955 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 TEDDM1Q5T9Z0 273 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 TAS1R1Q7RTX1 841 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 LRRC43Q8N309 656 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 BCL7CQ8WUZ0 217 aaPredicted RBP18.46■□□□□ 0.55
SMPD3-211ENST00000568373 ATP2A3Q93084 1043 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 ERP27Q96DN0 273 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 RBBP8Q99708 897 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 KIFC1Q9BW19 673 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 MYLK2Q9H1R3 596 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 TMEM248Q9NWD8 314 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 IGLV3-10A0A075B6K4 115 aa18.46■□□□□ 0.55
SMPD3-211ENST00000568373 CFAP73A6NFT4 308 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms