RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 NCKIPSDQ9NZQ3 722 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 FLRT1Q9NZU1 646 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CROTQ9UKG9 612 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 TMEM150BA6NC51 233 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 SLC15A5A6NIM6 579 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 ENPP3O14638 875 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CHMP2AO43633 222 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 UGT1A9O60656 530 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 RNASEH2AO75792 299 aaKnown RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 ALDH1A2O94788 518 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 VNN1O95497 513 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CALB1P05937 261 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 OCM2P0CE71 109 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 OCMP0CE72 109 aaPredicted RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 XRCC1P18887 633 aaPredicted RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 THOP1P52888 689 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 SLC5A3P53794 718 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 TBX4P57082 545 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 GUCA2AQ02747 115 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 GRSF1Q12849 480 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CEACAM7Q14002 265 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CCDC153Q494R4 210 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 IL23RQ5VWK5 629 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 STEAP4Q687X5 459 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 ZCCHC23Q6ZST2 131 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 ARMCX2Q7L311 632 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 USP37Q86T82 979 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 TRIM50Q86XT4 487 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 DSELQ8IZU8 1212 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 PGAM4Q8N0Y7 254 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 NDUFAF2Q8N183 169 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 TERB1Q8NA31 727 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 HIPK4Q8NE63 616 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 FNIP1Q8TF40 1166 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 TRUB1Q8WWH5 349 aaKnown RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 RSAD2Q8WXG1 361 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 ISL2Q96A47 359 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 HEPHQ9BQS7 1158 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 GPATCH1Q9BRR8 931 aaKnown RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 PI4K2AQ9BTU6 479 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 SLC13A1Q9BZW2 595 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 C10orf88Q9H8K7 445 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 COPS7BQ9H9Q2 264 aaPredicted RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 UGT1A7Q9HAW7 530 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 UGT1A10Q9HAW8 530 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 UGT1A8Q9HAW9 530 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CLK4Q9HAZ1 481 aaKnown RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 CYP4F11Q9HBI6 524 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 C1orf112Q9NSG2 853 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 PNPOQ9NVS9 261 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 DUS2Q9NX74 493 aaKnown RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 SCHIP1Q9P0W5 487 aaPredicted RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 SAE1Q9UBE0 346 aaPredicted RBP5.56□□□□□ -1.52
LINC01541-202ENST00000568095 SEPT3Q9UH03 358 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 ERGIC3Q9Y282 383 aa5.56□□□□□ -1.52
LINC01541-202ENST00000568095 TRIP12Q14669 1992 aaPredicted RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 RGSL1A5PLK6 1076 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 H3BMQ9 156 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 K7EPI3 171 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 TREHO43280 583 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 CST8O60676 142 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 GCATO75600 419 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ATE1O95260 518 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ERBB2P04626 1255 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 EIF2S1P05198 315 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 GARTP22102 1010 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 IL1R2P27930 398 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 DPP6P42658 865 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 MAGEA12P43365 314 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 NLRP11P59045 1033 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ABCE1P61221 599 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 YWHAGP61981 247 aaKnown RBP eCLIP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 MRPS22P82650 360 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 DAB2P98082 770 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 SLC10A2Q12908 348 aaPredicted RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 PEX6Q13608 980 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 CUL2Q13617 745 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ACAP1Q15027 740 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 NOMO1Q15155 1222 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 EML3Q32P44 896 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 DCAF6Q58WW2 860 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 WDR78Q5VTH9 848 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF534Q76KX8 674 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 COLGALT2Q8IYK4 626 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 TRIML2Q8N7C3 387 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 PPM1NQ8N819 430 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 RP9Q8TA86 221 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 TFAP2CQ92754 450 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ELMO3Q96BJ8 720 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 CCDC127Q96BQ5 260 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 COG8Q96MW5 612 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 OLFM1Q99784 485 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 TRIM56Q9BRZ2 755 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 NPLQ9BXD5 320 aaPredicted RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 ZNF518BQ9C0D4 1074 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 APOBEC3GQ9HC16 384 aaKnown RBP5.55□□□□□ -1.52
LINC01541-202ENST00000568095 VTA1Q9NP79 307 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 MAN1C1Q9NR34 630 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 GIT1Q9Y2X7 761 aa5.55□□□□□ -1.52
LINC01541-202ENST00000568095 PCDHB12Q9Y5F1 795 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms