RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GAB3Q8WWW8 586 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 PTPRN2Q92932 1015 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 VOPP1Q96AW1 172 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 RPL10LQ96L21 214 aaKnown RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 C2orf49Q9BVC5 232 aaPredicted RBP12.71□□□□□ -0.37
RNF40-211ENST00000567365 LACRTQ9GZZ8 138 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 MAGEH1Q9H213 219 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 EPC1Q9H2F5 836 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 SEMA4AQ9H3S1 761 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
RNF40-211ENST00000567365 ABCA7Q8IZY2 2146 aa12.71□□□□□ -0.38
RNF40-211ENST00000567365 FAM186AA6NE01 2351 aa12.71□□□□□ -0.38
RNF40-211ENST00000567365 DCLK1O15075 740 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 SMAD6O43541 496 aaKnown RBP12.7□□□□□ -0.38
RNF40-211ENST00000567365 BUB1BO60566 1050 aaPredicted RBP12.7□□□□□ -0.38
RNF40-211ENST00000567365 RAMP2O60895 175 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 SIN3BO75182 1162 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 ALDH1A2O94788 518 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 IGLV3-19P01714 112 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 EPHX1P07099 455 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 CD48P09326 243 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 VAV1P15498 845 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 ERCC2P18074 760 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 P2RY2P41231 377 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 VAV2P52735 878 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 MESDQ14696 234 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 STARD3Q14849 445 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 PPP6R3Q5H9R7 873 aaPredicted RBP12.7□□□□□ -0.38
RNF40-211ENST00000567365 ZC3H14Q6PJT7 736 aaKnown RBP12.7□□□□□ -0.38
RNF40-211ENST00000567365 NPWQ8N729 165 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 OR2T3Q8NH03 318 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 ATRIPQ8WXE1 791 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 FAF2Q96CS3 445 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 CSPG4P5Q96PW8 444 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 FAM129BQ96TA1 746 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 SLC6A17Q9H1V8 727 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 CATSPERBQ9H7T0 1116 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 ZWILCHQ9H900 591 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 FBRSQ9HAH7 460 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF40-211ENST00000567365 ETNK2Q9NVF9 386 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 USP36Q9P275 1121 aaKnown RBP12.7□□□□□ -0.38
RNF40-211ENST00000567365 RCOR3Q9P2K3 495 aaPredicted RBP12.7□□□□□ -0.38
RNF40-211ENST00000567365 SUN2Q9UH99 717 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 DUSP10Q9Y6W6 482 aa12.7□□□□□ -0.38
RNF40-211ENST00000567365 SDK1Q7Z5N4 2213 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 A0A0U1RQJ8 604 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 EDDM13A0A1B0GTR0 161 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 GOLGA6L3A6NEY3 463 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 C10orf142B7Z368 130 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 RASA4BC9J798 803 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 K7ERQ8 282 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 RASA4O43374 803 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 KDELR3O43731 214 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 ETFBP38117 255 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 SERPINH1P50454 418 aaKnown RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 CLCN6P51797 869 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 NDST2P52849 883 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 ST8SIA6P61647 398 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 RPS14P62263 151 aaKnown RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 KRT83P78385 493 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 SLC20A2Q08357 652 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 DPYSL3Q14195 570 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 POLD3Q15054 466 aaPredicted RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 HADHQ16836 314 aaKnown RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 PARP15Q460N3 678 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 LRRC38Q5VT99 294 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 TMPRSS6Q8IU80 811 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 TPCN2Q8NHX9 752 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 HSPH1Q92598 858 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 NKD2Q969F2 451 aaPredicted RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 HMCESQ96FZ2 354 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 ZC3H10Q96K80 434 aaKnown RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 TPSD1Q9BZJ3 242 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 RSPH9Q9H1X1 276 aaPredicted RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 PDFQ9HBH1 243 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 CD93Q9NPY3 652 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 LUC7LQ9NQ29 371 aaKnown RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 MBD1Q9UIS9 605 aaPredicted RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 MFHAS1Q9Y4C4 1052 aa12.69□□□□□ -0.38
RNF40-211ENST00000567365 TNRC6BQ9UPQ9 1833 aaKnown RBP12.69□□□□□ -0.38
RNF40-211ENST00000567365 C3orf70A6NLC5 250 aaPredicted RBP12.68□□□□□ -0.38
RNF40-211ENST00000567365 ZNF487B1APH4 448 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 H3BRJ5 948 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 SYNCRIPO60506 623 aaKnown RBP12.68□□□□□ -0.38
RNF40-211ENST00000567365 RPP40O75818 363 aaKnown RBP12.68□□□□□ -0.38
RNF40-211ENST00000567365 KRT7P08729 469 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 BCKDHBP21953 392 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 AMPD1P23109 780 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 SLC1A1P43005 524 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 CCZ1BP86790 482 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 CCZ1P86791 482 aaPredicted RBP12.68□□□□□ -0.38
RNF40-211ENST00000567365 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 SERINC3Q13530 473 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 DLG2Q15700 870 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 TAZQ16635 292 aa12.68□□□□□ -0.38
RNF40-211ENST00000567365 RETSATQ6NUM9 610 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms