RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 RASA4BC9J798 803 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 RNF103O00237 685 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TP73O15350 636 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 LINC01565O15544 149 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 RASA4O43374 803 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 MAP3K6O95382 1288 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 LTBRP36941 435 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 FDFT1P37268 417 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 NTHL1P78549 312 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 NHLH1Q02575 133 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TNK2Q07912 1038 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 AP1B1Q10567 949 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 WASHC5Q12768 1159 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 ADAM15Q13444 863 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TRADDQ15628 312 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 SMAD2Q15796 467 aaKnown RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 ANO4Q32M45 955 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 SPDYCQ5MJ68 293 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 RNASEH2BQ5TBB1 312 aaKnown RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 HIBCHQ6NVY1 386 aaPredicted RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 RFWD3Q6PCD5 774 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TMC5Q6UXY8 1006 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TFAP2DQ7Z6R9 452 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 PPIL6Q8IXY8 311 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 ZNF557Q8N988 423 aaPredicted RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 CCNYQ8ND76 341 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 FBXO25Q8TCJ0 367 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 MAML1Q92585 1016 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 USP13Q92995 863 aaPredicted RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 PPP1R2P1Q96PQ5 205 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 SLC39A8Q9C0K1 460 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 ADAM7Q9H2U9 754 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TRPV4Q9HBA0 871 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 NDFIP2Q9NV92 336 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 OBP2AQ9NY56 170 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 GDE1Q9NZC3 331 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 IGSF9Q9P2J2 1179 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TBC1D14Q9P2M4 693 aa12.8□□□□□ -0.36
CFDP1-207ENST00000566901 TPX2Q9ULW0 747 aaKnown RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 ZFP37Q9Y6Q3 630 aaPredicted RBP12.8□□□□□ -0.36
CFDP1-207ENST00000566901 WDFY4Q6ZS81 3184 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CXorf51AA0A1B0GTR3 108 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 DFFAO00273 331 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 SLC9A3R1O14745 358 aaPredicted RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 MATN3O15232 486 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CHADO15335 359 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ATP8B1O43520 1251 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 MAFKO60675 156 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ZSCAN5DPP0CG00 497 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ETS1P14921 441 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 FSHRP23945 695 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 OR1E1P30953 314 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 VPS41P49754 854 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ITGA8P53708 1063 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 PLTPP55058 493 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 OXCT1P55809 520 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 RPS24P62847 133 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CDK16Q00536 496 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 SEMA5AQ13591 1074 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 TRIP13Q15645 432 aaPredicted RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CTC1Q2NKJ3 1217 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 MPPE1Q53F39 396 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 RARS2Q5T160 578 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 TMCO4Q5TGY1 634 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ITPRIPL1Q6GPH6 555 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 SYCE2Q6PIF2 218 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 RNF135Q8IUD6 432 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 NPAS3Q8IXF0 933 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 TP53INP2Q8IXH6 220 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 KLHDC8BQ8IXV7 354 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ZCCHC9Q8N567 271 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 C12orf76Q8N812 135 aaPredicted RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ZSCAN18Q8TBC5 510 aaPredicted RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 EXOC4Q96A65 974 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 MYEOVQ96EZ4 313 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CELF6Q96J87 481 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ZNF599Q96NL3 588 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 IL12RB2Q99665 862 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 NEUROG2Q9H2A3 272 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 C10orf88Q9H8K7 445 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 IPO11Q9UI26 975 aaKnown RBP12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 C2orf16Q68DN1 1984 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 CACNA1HO95180 2353 aa12.79□□□□□ -0.36
CFDP1-207ENST00000566901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.78□□□□□ -0.36
CFDP1-207ENST00000566901 CACNG3O60359 315 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 LUC7L3O95232 432 aaKnown RBP12.78□□□□□ -0.36
CFDP1-207ENST00000566901 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 TPSB2P20231 275 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 PTPN3P26045 913 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 HSPA9P38646 679 aaKnown RBP12.78□□□□□ -0.36
CFDP1-207ENST00000566901 IFNAR2P48551 515 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 PAPOLAP51003 745 aaKnown RBP12.78□□□□□ -0.36
CFDP1-207ENST00000566901 GNA12Q03113 381 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 IL10RBQ08334 325 aa12.78□□□□□ -0.36
CFDP1-207ENST00000566901 ZNF177Q13360 481 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms