RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 KBTBD2Q8IY47 623 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 CCNYQ8ND76 341 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 UCMAQ8WVF2 138 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 FAM149B1Q96BN6 582 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 CLPTM1LQ96KA5 538 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 ECSITQ9BQ95 431 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 SLC17A6Q9P2U8 582 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 TRHDEQ9UKU6 1024 aa17.11■□□□□ 0.33
CMTM3-213ENST00000566756 TIMM44O43615 452 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 APOA4P06727 396 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 ACAT1P24752 427 aaKnown RBP17.1■□□□□ 0.33
CMTM3-213ENST00000566756 DNAJB1P25685 340 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 TKTP29401 623 aaKnown RBP17.1■□□□□ 0.33
CMTM3-213ENST00000566756 CD52P31358 61 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 NPY2RP49146 381 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 NUMBP49757 651 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 PSEN1P49768 467 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 CCNHP51946 323 aaPredicted RBP17.1■□□□□ 0.33
CMTM3-213ENST00000566756 PRKAA2P54646 552 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 RPL26P61254 145 aaKnown RBP17.1■□□□□ 0.33
CMTM3-213ENST00000566756 PPIDQ08752 370 aaKnown RBP17.1■□□□□ 0.33
CMTM3-213ENST00000566756 SEMA3BQ13214 749 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 KCTD11Q693B1 232 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 DCLK2Q8N568 766 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 VAT1Q99536 393 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 NR2E3Q9Y5X4 410 aa17.1■□□□□ 0.33
CMTM3-213ENST00000566756 TDRD15B5MCY1 1934 aaKnown RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 A0A1W2PQ45 241 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 A0A1W2PQY0 241 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 M0QYT0 321 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 ERVK-10P10266 1014 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 YY1P25490 414 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 PTPN3P26045 913 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 TUBP50607 506 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 EPGNQ6UW88 154 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 RDH11Q8TC12 318 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 PGAP3Q96FM1 320 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 FCRL3Q96P31 734 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 FAM192AQ9GZU8 254 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 CDH19Q9H159 772 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 LRRC4Q9HBW1 653 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 NSMCE4AQ9NXX6 385 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 RRN3Q9NYV6 651 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 KLHL8Q9P2G9 620 aaPredicted RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 VANGL2Q9ULK5 521 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 PHF24Q9UPV7 400 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 CENPFP49454 3210 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 ZCWPW2A0A1B0GU75 182 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 BUD23O43709 281 aaKnown RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 ADRA1BP35368 520 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 MLH1P40692 756 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 LILRA4P59901 499 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 ITGA9Q13797 1035 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 ITPRIPL1Q6GPH6 555 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 IZUMO2Q6UXV1 221 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 MCMBPQ9BTE3 642 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 YIPF3Q9GZM5 350 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 GBA3Q9H227 469 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 SPATS2LQ9NUQ6 558 aaKnown RBP17.09■□□□□ 0.33
CMTM3-213ENST00000566756 SEPT10Q9P0V9 454 aa17.09■□□□□ 0.33
CMTM3-213ENST00000566756 SLC22A2O15244 555 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 CREB3O43889 395 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 THP07101 528 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 ARRB2P32121 409 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 SLC25A3Q00325 362 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 ANKRD20A4Q4UJ75 823 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 ZNF618Q5T7W0 954 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 AGMOQ6ZNB7 445 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 STRA8Q7Z7C7 330 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 DHDDSQ86SQ9 333 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 SIX6OS1Q8N1H7 587 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 OR52K1Q8NGK4 314 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 ZNF669Q96BR6 464 aaPredicted RBP17.08■□□□□ 0.33
CMTM3-213ENST00000566756 GORASP1Q9BQQ3 440 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 GOLGA2P5Q9HBQ8 144 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 STARD7Q9NQZ5 370 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 RNF19AQ9NV58 838 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 PPM1HQ9ULR3 514 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 ANKRD6Q9Y2G4 727 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.33
CMTM3-213ENST00000566756 ARHGAP42A6NI28 874 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 G3V2L1 256 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 GABRDO14764 452 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 CKBP12277 381 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
CMTM3-213ENST00000566756 ERCC2P18074 760 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 CSRP3P50461 194 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 ZNF33AQ06730 810 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 CDC16Q13042 620 aa17.08■□□□□ 0.32
CMTM3-213ENST00000566756 BSPRYQ5W0U4 402 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms