RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 RPL15P61313 204 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 MRPS5P82675 430 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 MC2RQ01718 297 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CDK18Q07002 472 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 ZNF844Q08AG5 666 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SEMA3BQ13214 749 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CCNIQ14094 377 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PCLAFQ15004 111 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PPP2R5BQ15173 497 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 AP5B1Q2VPB7 878 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 C2orf76Q3KRA6 126 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 DPCR1Q3MIW9 517 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 ZSCAN23Q3MJ62 389 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SUPT20HL1Q3ZLR7 823 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PREPLQ4J6C6 727 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 IGSF11Q5DX21 431 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CC2D1BQ5T0F9 858 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 WDR73Q6P4I2 378 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 TMEM81Q6P7N7 255 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 MAMDC4Q6UXC1 1216 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SPATA31D4Q6ZUB0 917 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC46A3Q7Z3Q1 461 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 ADGRA1Q86SQ6 560 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CMTM4Q8IZR5 234 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SYCP3Q8IZU3 236 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 VPS52Q8N1B4 723 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 METTL25Q8N6Q8 603 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 FAR2Q96K12 515 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 DGAT2Q96PD7 388 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 PRAM1Q96QH2 718 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 CCDC106Q9BWC9 280 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 MRIQ9BWK5 157 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 TNMDQ9H2S6 317 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 FBRSL1Q9HCM7 1045 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SH3BP4Q9P0V3 963 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 POGKQ9P215 609 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 EPS15L1Q9UBC2 864 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 FBXL17Q9UF56 701 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SEC63Q9UGP8 760 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 NDRG4Q9ULP0 352 aaKnown RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 UBE2J1Q9Y385 318 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 SNX14Q9Y5W7 946 aa3.5□□□□□ -1.85
HERPUD1-211ENST00000566550 GOLGA6L10A0A0M3HER8 536 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 A0A1W2PRV1 198 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 A6NL46 340 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 B5MCH6 92 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 M0QZQ0 153 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SCAMP1O15126 338 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 WDR46O15213 610 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 MATN3O15232 486 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 PJA2O43164 708 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 TXNL1O43396 289 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 LIASO43766 372 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CBFA2T3O75081 653 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 PENKP01210 267 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ZNF888P0CJ79 500 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 TMEM225BP0DP42 221 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 KCNA2P16389 499 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 MGAT1P26572 445 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 EPHA3P29320 983 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 RFC1P35251 1148 aaPredicted RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 HNF1BP35680 557 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 MATR3P43243 847 aaKnown RBP eCLIP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SLURP1P55000 103 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ARHGAP8P85298 464 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SCN1BQ07699 218 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 TCF15Q12870 199 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 AIMP2Q13155 320 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CBX3Q13185 183 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SLC14A1Q13336 389 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 MRPL49Q13405 166 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SNTB1Q13884 538 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CBFBQ13951 182 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 E2F2Q14209 437 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 TNIP1Q15025 636 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 LY6KQ17RY6 165 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NRN1LQ496H8 165 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NHSL2Q5HYW2 709 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 AGBL4Q5VU57 503 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 TSSK4Q6SA08 328 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SARM1Q6SZW1 724 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 C16orf89Q6UX73 402 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 CLEC17AQ6ZS10 378 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 GLRX5Q86SX6 157 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ARHGAP12Q8IWW6 846 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 PEX5LQ8IYB4 626 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SIX6OS1Q8N1H7 587 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SHCBP1Q8NEM2 672 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ANKRD20A12PQ8NF67 263 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NUDT10Q8NFP7 164 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ZFP28Q8NHY6 868 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 DUSP19Q8WTR2 217 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 SEPT1Q8WYJ6 367 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 ZCCHC14Q8WYQ9 949 aaKnown RBP3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 NPIPB3Q92617 1050 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 GTF3C6Q969F1 213 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM162AQ96A26 154 aa3.49□□□□□ -1.85
HERPUD1-211ENST00000566550 FAM149B1Q96BN6 582 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms