RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HAPLN3Q96S86 360 aa20.7■□□□□ 0.9
CLN6-207ENST00000566347 FAM207AQ9NSI2 230 aaPredicted RBP20.7■□□□□ 0.9
CLN6-207ENST00000566347 NOCTQ9UK39 431 aaKnown RBP20.7■□□□□ 0.9
CLN6-207ENST00000566347 IGLV3-10A0A075B6K4 115 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3DA0A087WVF3 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3IA0A087WXS9 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3EA0A087X179 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3KA0A087X1G2 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3FA6NER0 549 aaPredicted RBP20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3LB9A6J9 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 H0Y8X5 98 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 I6L893 689 aaPredicted RBP20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3HP0C7X1 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 SOX5P35711 763 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 GRK6P43250 576 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 POLR2FP61218 127 aaKnown RBP20.69■□□□□ 0.9
CLN6-207ENST00000566347 INAVAQ3KP66 663 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 C2CD6Q53TS8 623 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3GQ6DHY5 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3CQ6IPX1 549 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 Q6ZVU0 165 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 BNIPLQ7Z465 357 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 TBC1D3Q8IZP1 549 aaPredicted RBP20.69■□□□□ 0.9
CLN6-207ENST00000566347 GPT2Q8TD30 523 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 CCDC114Q96M63 670 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 EBF2Q9HAK2 575 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 AASDHPPTQ9NRN7 309 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 ANO10Q9NW15 660 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 FANCLQ9NW38 375 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 PPM1HQ9ULR3 514 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 FARP1Q9Y4F1 1045 aaPredicted RBP20.69■□□□□ 0.9
CLN6-207ENST00000566347 SNX10Q9Y5X0 201 aa20.69■□□□□ 0.9
CLN6-207ENST00000566347 E9PAM4 449 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 GOLGA6L22H0YM25 854 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 LATO43561 262 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 CYP1A1P04798 512 aaPredicted RBP20.68■□□□□ 0.9
CLN6-207ENST00000566347 CD38P28907 300 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 NUDT1P36639 197 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 KLK7P49862 253 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 CLCN6P51797 869 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 JAM2P57087 298 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 SLC45A4Q5BKX6 768 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 KCNT1Q5JUK3 1230 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 SASS6Q6UVJ0 657 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 ZNF783Q6ZMS7 281 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 TRIM72Q6ZMU5 477 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 DCAF4L2Q8NA75 395 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 ATP11CQ8NB49 1132 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 SLC20A1Q8WUM9 679 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 SERAC1Q96JX3 654 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 CFAP57Q96MR6 1250 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 PSMB7Q99436 277 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 VPS51Q9UID3 782 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 SARDHQ9UL12 918 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 ZMIZ1Q9ULJ6 1067 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 TP53BP1Q12888 1972 aaPredicted RBP20.68■□□□□ 0.9
CLN6-207ENST00000566347 DOCK4Q8N1I0 1966 aa20.68■□□□□ 0.9
CLN6-207ENST00000566347 ASPMQ8IZT6 3477 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 FAM170AA1A519 330 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 KCNK3O14649 394 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 PLRG1O43660 514 aaKnown RBP20.67■□□□□ 0.9
CLN6-207ENST00000566347 SRCP12931 536 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 MMP8P22894 467 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 OR1E1P30953 314 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 STAT1P42224 750 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 FMO1Q01740 532 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 TRNP1Q6NT89 227 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 TFAP2DQ7Z6R9 452 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 PRPF39Q86UA1 669 aaKnown RBP20.67■□□□□ 0.9
CLN6-207ENST00000566347 FAM131BQ86XD5 332 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 PNPLA1Q8N8W4 532 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 PIP4K2CQ8TBX8 421 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 NLRC4Q9NPP4 1024 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 METTL5Q9NRN9 209 aaKnown RBP20.67■□□□□ 0.9
CLN6-207ENST00000566347 TMPRSS4Q9NRS4 437 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 MPP6Q9NZW5 540 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 SIK3Q9Y2K2 1263 aa20.67■□□□□ 0.9
CLN6-207ENST00000566347 A0A1B0GTQ1 180 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 ILVBLA1L0T0 632 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 BNIP3LO60238 219 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 SNAP91O60641 907 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 SRGAP2O75044 1071 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 RTN2O75298 545 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 ENDOD1O94919 500 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 WNT1P04628 370 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 METAP1P53582 386 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 COPB1P53618 953 aaKnown RBP20.66■□□□□ 0.9
CLN6-207ENST00000566347 PPP2CBP62714 309 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 PPP2CAP67775 309 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 MYL5Q02045 173 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 CCDC15Q0P6D6 951 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 CNTN1Q12860 1018 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 STX1AQ16623 288 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 AGBL4Q5VU57 503 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 SLCO6A1Q86UG4 719 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 ZCCHC14Q8WYQ9 949 aaKnown RBP20.66■□□□□ 0.9
CLN6-207ENST00000566347 ELF4Q99607 663 aaPredicted RBP20.66■□□□□ 0.9
CLN6-207ENST00000566347 ZYG11BQ9C0D3 744 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 GDF3Q9NR23 364 aa20.66■□□□□ 0.9
CLN6-207ENST00000566347 LIMA1Q9UHB6 759 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms