RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 FARP1Q9Y4F1 1045 aaPredicted RBP20.36■□□□□ 0.85
CMTM3-211ENST00000565922 ALOX15BO15296 676 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 LRIG2O94898 1065 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 GYPCP04921 128 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 CFIP05156 583 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 RHOQP17081 205 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 C5AR1P21730 350 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 PSMA2P25787 234 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 L1CAMP32004 1257 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 RAB6CQ53S08 254 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 STPG1Q5TH74 334 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 HGSNATQ68CP4 663 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 RETSATQ6NUM9 610 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 FAM124AQ86V42 546 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 MMAAQ8IVH4 418 aaKnown RBP20.35■□□□□ 0.85
CMTM3-211ENST00000565922 ATP11CQ8NB49 1132 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 FRS2Q8WU20 508 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 EPAS1Q99814 870 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 OMDQ99983 421 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.35■□□□□ 0.85
CMTM3-211ENST00000565922 RAB6CQ9H0N0 254 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 ISCUQ9H1K1 167 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 TMEM248Q9NWD8 314 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 FBXL12Q9NXK8 326 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 DONSONQ9NYP3 566 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 ZNF212Q9UDV6 495 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 VPS51Q9UID3 782 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 FZD4Q9ULV1 537 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 SLC6A14Q9UN76 642 aa20.35■□□□□ 0.85
CMTM3-211ENST00000565922 CXorf51AA0A1B0GTR3 108 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 METTL12A8MUP2 240 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 PATE3B3GLJ2 98 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 EIF3CLB5ME19 914 aaKnown RBP20.34■□□□□ 0.85
CMTM3-211ENST00000565922 RNF8O76064 485 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 SEMA4FO95754 770 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 SERPINF2P08697 491 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 TPM1P09493 284 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 HTR7P34969 479 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 NUMBP49757 651 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 FOXK2Q01167 660 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 GNA12Q03113 381 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 GFPT1Q06210 699 aaPredicted RBP20.34■□□□□ 0.85
CMTM3-211ENST00000565922 SLC20A2Q08357 652 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 DLG2Q15700 870 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 DCAF12L1Q5VU92 463 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 FAM46CQ5VWP2 391 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 DRC7Q8IY82 874 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 STK40Q8N2I9 435 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 DNASE2BQ8WZ79 361 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 PSMB7Q99436 277 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 EIF3CQ99613 913 aaKnown RBP20.34■□□□□ 0.85
CMTM3-211ENST00000565922 ATP13A1Q9HD20 1204 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 TMEM9BQ9NQ34 198 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 RXFP3Q9NSD7 469 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 ADAMTS1Q9UHI8 967 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 PCDH15Q96QU1 1955 aa20.34■□□□□ 0.85
CMTM3-211ENST00000565922 A0A0D9SEW6 157 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 C1QTNF3-AMACRE9PGA6 284 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 MID1O15344 667 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 ATMINO43313 823 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-211ENST00000565922 IL1BP01584 269 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 SYPP08247 313 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 SRCP12931 536 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 CASP14P31944 242 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 SLC8A1P32418 973 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 ACSL1P33121 698 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 PSMD8P48556 350 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 ATXN3P54252 364 aaPredicted RBP20.33■□□□□ 0.85
CMTM3-211ENST00000565922 GEMIN4P57678 1058 aaKnown RBP20.33■□□□□ 0.85
CMTM3-211ENST00000565922 IRX4P78413 519 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 DAB2IPQ5VWQ8 1189 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 SPECC1LQ69YQ0 1117 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 FAM129BQ96TA1 746 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 SPON2Q9BUD6 331 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 CATSPERBQ9H7T0 1116 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 FZD10Q9ULW2 581 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 HPCAL4Q9UM19 191 aa20.33■□□□□ 0.85
CMTM3-211ENST00000565922 CACNA1EQ15878 2313 aa20.33■□□□□ 0.84
CMTM3-211ENST00000565922 A0A1B0GTW7 788 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 A0A1W2PP55 124 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 TMEM191CA6NGB0 347 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 LRRC72A6NJI9 287 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 CBX4O00257 560 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 MCF2LO15068 1137 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 SNAP91O60641 907 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 RNASEH2AO75792 299 aaKnown RBP20.32■□□□□ 0.84
CMTM3-211ENST00000565922 RECQLP46063 649 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-211ENST00000565922 OGDHQ02218 1023 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 ARTNQ5T4W7 220 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 Q6ZVU0 165 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 NLRP14Q86W24 1093 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 OR7D4Q8NG98 312 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 MAGEH1Q9H213 219 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 TPX2Q9ULW0 747 aaKnown RBP20.32■□□□□ 0.84
CMTM3-211ENST00000565922 DCHS1Q96JQ0 3298 aa20.32■□□□□ 0.84
CMTM3-211ENST00000565922 TP53BP1Q12888 1972 aaPredicted RBP20.32■□□□□ 0.84
CMTM3-211ENST00000565922 FAM72CH0Y354 149 aa20.31■□□□□ 0.84
CMTM3-211ENST00000565922 FGF10O15520 208 aaPredicted RBP20.31■□□□□ 0.84
CMTM3-211ENST00000565922 RAMP2O60895 175 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms