RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PRAMEF2O60811 474 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ACTL6BO94805 426 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 FGAP02671 866 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 BMPR1AP36894 532 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 RNASELQ05823 741 aaKnown RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ANKRD1Q15327 319 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 GALNTL6Q49A17 601 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 LVRNQ6Q4G3 990 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 HEATR4Q86WZ0 1026 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 KRTAP1-3Q8IUG1 177 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 SCYL3Q8IZE3 742 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 HAS1Q92839 578 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 CTHRC1Q96CG8 243 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 MXD3Q9BW11 206 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 VPS16Q9H269 839 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 TDRD3Q9H7E2 651 aaKnown RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 TLR8Q9NR97 1041 aaKnown RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 ING1Q9UK53 422 aaPredicted RBP4.59□□□□□ -1.67
LINC00561-201ENST00000565815 GABRQQ9UN88 632 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 FZD1Q9UP38 647 aa4.59□□□□□ -1.67
LINC00561-201ENST00000565815 PNMA6EA0A0J9YXQ4 647 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.59□□□□□ -1.68
LINC00561-201ENST00000565815 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.59□□□□□ -1.68
LINC00561-201ENST00000565815 TCP10L2B9ZVM9 353 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 NEMFO60524 1076 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 ENTPD3O75355 529 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 ITGA5P08648 1049 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 CYP2C18P33260 490 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 RGS2P41220 211 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 MTAPQ13126 283 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 TAF3Q5VWG9 929 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 MFSD14CQ5VZR4 134 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 CREBRFQ8IUR6 639 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 SMCR8Q8TEV9 937 aaPredicted RBP4.59□□□□□ -1.68
LINC00561-201ENST00000565815 TTC14Q96N46 770 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 ASB2Q96Q27 587 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 FAM167BQ9BTA0 163 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 KIF3AQ9Y496 699 aa4.59□□□□□ -1.68
LINC00561-201ENST00000565815 RFX7Q2KHR2 1363 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A18PA6NE21 464 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A16PA6NEW6 464 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A9PA6NNJ1 464 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A5PA8MXJ8 464 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 STX6O43752 255 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A15PP0C7V4 464 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FAM90A14PP0C7W9 464 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 UBTFL1P0CB47 393 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 CCDC192P0DO97 292 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 PRKAR1BP31321 381 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 RAE1P78406 368 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FOXE3Q13461 319 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 MTX1Q13505 466 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 PKP1Q13835 747 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 GCKRQ14397 625 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 CAVIN4Q5BKX8 364 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 RNASE12Q5GAN4 147 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 KAZNQ674X7 775 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 SYT13Q7L8C5 426 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 CPOQ8IVL8 374 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 OTUD7AQ8TE49 926 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 HERC2P3Q9BVR0 1158 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 SEZ6LQ9BYH1 1024 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 OSBPL5Q9H0X9 879 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 MTIF3Q9H2K0 278 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 TM7SF3Q9NS93 570 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 NRBP1Q9UHY1 535 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 RAB21Q9UL25 225 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 SMC3Q9UQE7 1217 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 DNM1LO00429 736 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 HNRNPDLO14979 420 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 TNRC18O15417 2968 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 HEXIM1O94992 359 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 TUBB4AP04350 444 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 PSMA5P28066 241 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 ALDH18A1P54886 795 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 BIRC3Q13489 604 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 AASDHQ4L235 1098 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 MIIPQ5JXC2 388 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 TMED8Q6PL24 325 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 GATAD2AQ86YP4 633 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 P3H2Q8IVL5 708 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 GPR150Q8NGU9 434 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 MBD3L2Q8NHZ7 208 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 CLEC4CQ8WTT0 213 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 FUCA2Q9BTY2 467 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 ZNF747Q9BV97 191 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 INO80BQ9C086 356 aaPredicted RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 TMEM39BQ9GZU3 492 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 DDX19AQ9NUU7 478 aaKnown RBP4.58□□□□□ -1.68
LINC00561-201ENST00000565815 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
LINC00561-201ENST00000565815 MROH5Q6ZUA9 1318 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 MAST2Q6P0Q8 1798 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 H0YIZ8 118 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 EYA2O00167 538 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 MBPP02686 304 aaPredicted RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ITGA2BP08514 1039 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 NHLRC4P0CG21 123 aaPredicted RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ZFXP17010 805 aaPredicted RBP4.57□□□□□ -1.68
LINC00561-201ENST00000565815 ADRA1BP35368 520 aa4.57□□□□□ -1.68
LINC00561-201ENST00000565815 TUBP50607 506 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms